RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 HES2Q9Y543 173 aa17.63■□□□□ 0.41
FDPS-212ENST00000487002 SMIM28A0A1B0GU29 152 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 KPNA7A9QM74 516 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 HAS3O00219 553 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 TM9SF1O15321 606 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 KCNN4O15554 427 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 RPA3P35244 121 aaPredicted RBP17.62■□□□□ 0.41
FDPS-212ENST00000487002 ELK3P41970 407 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 NR2C2P49116 596 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 EFTUD2Q15029 972 aaKnown RBP eCLIP17.62■□□□□ 0.411e-8■■□□□ 13.2
FDPS-212ENST00000487002 SNX17Q15036 470 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 SV2CQ496J9 727 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 MORN1Q5T089 497 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 CYB5D1Q6P9G0 228 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 TLK2Q86UE8 772 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 DPEP3Q9H4B8 488 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 NRDE2Q9H7Z3 1164 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 PRDM16Q9HAZ2 1276 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 GPATCH2LQ9NWQ4 482 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 CHMP2BQ9UQN3 213 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 PIN4Q9Y237 131 aaKnown RBP17.62■□□□□ 0.41
FDPS-212ENST00000487002 UBOX5O94941 541 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 KRT4P19013 534 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 GNL1P36915 607 aaPredicted RBP17.62■□□□□ 0.41
FDPS-212ENST00000487002 TAF6P49848 677 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 CA9Q16790 459 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 HHATQ5VTY9 493 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 LRRC8CQ8TDW0 803 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 PAIP2Q9BPZ3 127 aaKnown RBP17.62■□□□□ 0.41
FDPS-212ENST00000487002 SNX25Q9H3E2 840 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 RAB6BQ9NRW1 208 aa17.62■□□□□ 0.41
FDPS-212ENST00000487002 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 A0A1W2PPM1 405 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 CYP2F1P24903 491 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 PSEN2P49810 448 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 CPT1AP50416 773 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 STRADAQ7RTN6 431 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 TAB3Q8N5C8 712 aaPredicted RBP17.61■□□□□ 0.41
FDPS-212ENST00000487002 MCUQ8NE86 351 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 LRRC39Q96DD0 335 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 TNIP3Q96KP6 325 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 PTPN18Q99952 460 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 B3GNT5Q9BYG0 378 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 GJD2Q9UKL4 321 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 HEY1Q9Y5J3 304 aa17.61■□□□□ 0.41
FDPS-212ENST00000487002 TCRBV9S1A1TA0A576 114 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 KBTBD13C9JR72 458 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 GSTA2P09210 222 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 CCDC130P13994 396 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 RBL1P28749 1068 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 L1CAMP32004 1257 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 BNIP1Q12981 228 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 CCDC63Q8NA47 563 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 SLC44A1Q8WWI5 657 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 PHTF1Q9UMS5 762 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 EDF1O60869 148 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 FAM163BP0C2L3 166 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 FGFR1P11362 822 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 ALADP13716 330 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 AKAP5P24588 427 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 ADORA2BP29275 332 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 SKIV2L2P42285 1042 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 NRLP54845 237 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 YWHAZP63104 245 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 ZNF200P98182 395 aaPredicted RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.414e-33■■■□□ 17.7
FDPS-212ENST00000487002 SLC1A5Q15758 541 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 SLC45A4Q5BKX6 768 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 FAM133BQ5BKY9 247 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 EFHC1Q5JVL4 640 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 UBXN11Q5T124 520 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 PSTKQ8IV42 348 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 IGDCC3Q8IVU1 814 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 C7orf31Q8N865 590 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 BANPQ8N9N5 519 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 MRRFQ96E11 262 aaKnown RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 APOL6Q9BWW8 343 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 RCOR3Q9P2K3 495 aaPredicted RBP17.6■□□□□ 0.41
FDPS-212ENST00000487002 GRID1Q9ULK0 1009 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 AP4E1Q9UPM8 1137 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 IKBKGQ9Y6K9 419 aa17.6■□□□□ 0.41
FDPS-212ENST00000487002 XPO1O14980 1071 aaKnown RBP17.59■□□□□ 0.41
FDPS-212ENST00000487002 SPTLC1O15269 473 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 GCATO75600 419 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 FAM155BO75949 473 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 ZNF865P0CJ78 1059 aaPredicted RBP17.59■□□□□ 0.41
FDPS-212ENST00000487002 TPSB2P20231 275 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
FDPS-212ENST00000487002 DNAJC3Q13217 504 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 TPSAB1Q15661 275 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 PPP6R3Q5H9R7 873 aaPredicted RBP17.59■□□□□ 0.41
FDPS-212ENST00000487002 LVRNQ6Q4G3 990 aa17.59■□□□□ 0.41
FDPS-212ENST00000487002 PARP9Q8IXQ6 854 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms