RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ZNF512Q96ME7 567 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 SLITRK1Q96PX8 696 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 TRIM62Q9BVG3 475 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 ASAH2Q9NR71 780 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 TLR8Q9NR97 1041 aaKnown RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 HCFC1R1Q9NWW0 138 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 CTTNBP2NLQ9P2B4 639 aa10.03□□□□□ -0.8
MCF2L-227ENST00000486806 DNMT3BQ9UBC3 853 aaKnown RBP10.03□□□□□ -0.8
MCF2L-227ENST00000486806 KRT86O43790 486 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MOSPD3O75425 235 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 FGF19O95750 216 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 OLFM2O95897 454 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 RHOP08100 348 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 GABRR2P28476 465 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 CDC25CP30307 473 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 LTBRP36941 435 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MATKP42679 507 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 PTPN9P43378 593 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 ZNF143P52747 638 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 DLX2Q07687 328 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 TAF12Q16514 161 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 SLC5A9Q2M3M2 681 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 PRSS36Q5K4E3 855 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MSANTD2Q6P1R3 559 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 TMC5Q6UXY8 1006 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 GPR149Q86SP6 731 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 ZNF276Q8N554 614 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 DEFB123Q8N688 67 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 NIPA2Q8N8Q9 360 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 SMG7Q92540 1137 aaKnown RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 GOLGA1Q92805 767 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MSLNLQ96KJ4 702 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 CORO1BQ9BR76 489 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 DDX23Q9BUQ8 820 aaKnown RBP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 S1PR5Q9H228 398 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 ABCC13Q9NSE7 274 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 CAPN6Q9Y6Q1 641 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 REV3LO60673 3130 aa10.02□□□□□ -0.81
MCF2L-227ENST00000486806 MACROD2A1Z1Q3 448 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 GRID2IPA4D2P6 1211 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 GOLGA6L9A6NEM1 432 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CCP110O43303 1012 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TLR5O60602 858 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 NCAM1P13591 858 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 RARGP13631 454 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 FOSL2P15408 326 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 PTPN2P17706 415 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 GPD1P21695 349 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 MAN1A1P33908 653 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 NOS2P35228 1153 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 PITX1P78337 314 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 NTHL1P78549 312 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 EIF4EBP2Q13542 120 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CCDC14Q49A88 953 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 PABPC1LQ4VXU2 614 aaKnown RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 ARHGAP29Q52LW3 1261 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 RARS2Q5T160 578 aaKnown RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 SYPL2Q5VXT5 272 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 C11orf63Q6NUN7 778 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 DCUN1D2Q6PH85 259 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 KLHDC10Q6PID8 442 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 PDZD4Q76G19 769 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 GRASPQ7Z6J2 395 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TAC4Q86UU9 113 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 DEFB106AQ8N104 65 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 C17orf53Q8N3J3 647 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 RNF10Q8N5U6 811 aaKnown RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 LRRC57Q8N9N7 239 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 DQX1Q8TE96 717 aaKnown RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 EDEM1Q92611 657 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CENPIQ92674 756 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TCEAL4Q96EI5 215 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 PGAP3Q96FM1 320 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 BTBD6Q96KE9 485 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 NPY6RQ99463 290 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 ADAM7Q9H2U9 754 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 SMOC2Q9H3U7 446 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CCSER2Q9H7U1 834 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 LZTFL1Q9NQ48 299 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TRMT1Q9NXH9 659 aaKnown RBP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CLDND1Q9NY35 253 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.01□□□□□ -0.81
MCF2L-227ENST00000486806 TRPM5Q9NZQ8 1165 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 CALCOCO1Q9P1Z2 691 aa10.01□□□□□ -0.81
MCF2L-227ENST00000486806 LCMT1Q9UIC8 334 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms