RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ZCWPW2Q504Y3 356 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 SDE2Q6IQ49 451 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 MTHFD1LQ6UB35 978 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 MIB1Q86YT6 1006 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 PPHLN1Q8NEY8 458 aaKnown RBP11.41□□□□□ -0.58
HDAC6-228ENST00000486227 SLC26A7Q8TE54 656 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 BSNDQ8WZ55 320 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 APBA2Q99767 749 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 TSSK1BQ9BXA7 367 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 CATSPERBQ9H7T0 1116 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
HDAC6-228ENST00000486227 MTO1Q9Y2Z2 717 aaKnown RBP11.41□□□□□ -0.58
HDAC6-228ENST00000486227 CHEK2O96017 543 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 PAEPP09466 180 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 RPL10AP62906 217 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 XRCC4Q13426 336 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 HIC1Q14526 733 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 NFIL3Q16649 462 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ANO4Q32M45 955 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 WASHC2DQ5SRD0 308 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 MROH9Q5TGP6 573 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 DLK2Q6UY11 383 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 GPR142Q7Z601 462 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 PPWD1Q96BP3 646 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 NSL1Q96IY1 281 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ATRNL1Q5VV63 1379 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 UBTFL6P0CB48 400 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 IRF1P10914 325 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 RPL21P46778 160 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 PHEXP78562 749 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 RABGAP1LQ5R372 815 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 IL31Q6EBC2 164 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 CXCL17Q6UXB2 119 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 SEMA4DQ92854 862 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 HAUS8Q9BT25 410 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 DSEQ9UL01 958 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 PHTF1Q9UMS5 762 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 TBKBP1A7MCY6 615 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ZNF862O60290 1169 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 AMHP03971 560 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 POLBP06746 335 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 DRD4P21917 467 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 LHX1P48742 406 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 GEMIN4P57678 1058 aaKnown RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 FSCBQ5H9T9 825 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ZNF280DQ6N043 979 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 DENND1BQ6P3S1 775 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 SLC25A41Q8N5S1 370 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 SLC2A14Q8TDB8 520 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 MTBPQ96DY7 904 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 BCAS3Q9H6U6 928 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 CHST7Q9NS84 486 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 C20orf96Q9NUD7 363 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-228ENST00000486227 LRCH1Q9Y2L9 728 aa11.4□□□□□ -0.58
HDAC6-228ENST00000486227 TRIM49D1C9J1S8 452 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 ZNF263O14978 683 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 NOL4O94818 638 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 SERPINB9P50453 376 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.59
HDAC6-228ENST00000486227 NFE2Q16621 373 aaPredicted RBP11.4□□□□□ -0.59
HDAC6-228ENST00000486227 LVRNQ6Q4G3 990 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 TAS2R42Q7RTR8 314 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 LRRC6Q86X45 466 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 C12orf56Q8IXR9 622 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 PTPRN2Q92932 1015 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 CAPNS2Q96L46 248 aa11.4□□□□□ -0.59
HDAC6-228ENST00000486227 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.59
HDAC6-228ENST00000486227 E5RJQ4 531 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 OPLAHO14841 1288 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 PMPCBO75439 489 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 SERPINB3P29508 390 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 USP10Q14694 798 aaKnown RBP11.39□□□□□ -0.59
HDAC6-228ENST00000486227 GAD1Q99259 594 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-228ENST00000486227 PHRF1Q9P1Y6 1649 aaKnown RBP11.39□□□□□ -0.59
HDAC6-228ENST00000486227 E5RI56 91 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 MTSS1O43312 755 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 AHCYL1O43865 530 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 SNX2O60749 519 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 F9P00740 461 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 ETFBP38117 255 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 ADIGQ0VDE8 80 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 C4orf22Q6V702 233 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 MFSD14AQ96MC6 490 aa11.39□□□□□ -0.59
HDAC6-228ENST00000486227 FRMD8Q9BZ67 464 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms