RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FAM183BPQ6ZVS7 135 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 PHF13Q86YI8 300 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ARL14EPQ8N8R7 260 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 TC2NQ8N9U0 490 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 TTC16Q8NEE8 873 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 CLEC4CQ8WTT0 213 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 NDRG1Q92597 394 aaKnown RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 PANX2Q96RD6 677 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 CCSER2Q9H7U1 834 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 CLIC5Q9NZA1 410 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ARHGAP20Q9P2F6 1191 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 WDR35Q9P2L0 1181 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 EPS15L1Q9UBC2 864 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 SSU72P8A0A1W2PR75 194 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 ANKRD62A6NC57 917 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 YJEFN3A6XGL0 299 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 E7ENQ6 273 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 STK25O00506 426 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 DDX3XO00571 662 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUP50-216ENST00000486184 NRDCO43847 1150 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 HSF2BPO75031 334 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 RTN2O75298 545 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 ZDHHC11BP0C7U3 371 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 GZMAP12544 262 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 NCAM1P13591 858 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 MMP8P22894 467 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 GABRB2P47870 512 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
NUP50-216ENST00000486184 CDK17Q00537 523 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
NUP50-216ENST00000486184 BSPRYQ5W0U4 402 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 SCD5Q86SK9 330 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 DDX42Q86XP3 938 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUP50-216ENST00000486184 ZDHHC14Q8IZN3 488 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 EDEM1Q92611 657 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 SMARCD2Q92925 531 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 SELENOOQ9BVL4 669 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 SLC46A2Q9BY10 475 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 NHEJ1Q9H9Q4 299 aaPredicted RBP11.93□□□□□ -0.5
NUP50-216ENST00000486184 KIF9Q9HAQ2 790 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 NMUR1Q9HB89 426 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 ZFP14Q9HCL3 533 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUP50-216ENST00000486184 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 TJP2Q9UDY2 1190 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 RASAL2Q9UJF2 1139 aa11.93□□□□□ -0.5
NUP50-216ENST00000486184 COCHO43405 550 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 OAS1P00973 400 aaKnown RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 FTLP02792 175 aaPredicted RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 GLI1P08151 1106 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 BMP1P13497 986 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 DESP17661 470 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 CYLC1P35663 651 aaPredicted RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 SCNN1AP37088 669 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 RNASE9P60153 205 aaKnown RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 ZP2Q05996 745 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 EFEMP1Q12805 493 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 C2CD6Q53TS8 623 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 FAM78AQ5JUQ0 283 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 DNAJC24Q6P3W2 148 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 MON1BQ7L1V2 547 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 MIB1Q86YT6 1006 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 TMTC1Q8IUR5 882 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 ARID3BQ8IVW6 561 aaPredicted RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 CELF5Q8N6W0 485 aaKnown RBP11.92□□□□□ -0.5
NUP50-216ENST00000486184 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 VCPIP1Q96JH7 1222 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 ZSWIM3Q96MP5 696 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 ASB16Q96NS5 453 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 CYP2S1Q96SQ9 504 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 NUDT5Q9UKK9 219 aa11.92□□□□□ -0.5
NUP50-216ENST00000486184 A0A087X0T9 212 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 LOC730098B7Z3J9 87 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 DAB1O75553 588 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 GRAP2O75791 330 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 FAM228BP0C875 321 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 MYBL1P10243 752 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 WEE1P30291 646 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 SLC7A9P82251 487 aa11.91□□□□□ -0.5
NUP50-216ENST00000486184 GFPT1Q06210 699 aaPredicted RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
NUP50-216ENST00000486184 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms