RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 HOXC11O43248 304 aaPredicted RBP18.1■□□□□ 0.49
SMC4-216ENST00000485645 TBX18O95935 607 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 CD58P19256 250 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 ACO1P21399 889 aaKnown RBP18.1■□□□□ 0.49
SMC4-216ENST00000485645 KCNA4P22459 653 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 ATP5C1P36542 298 aaKnown RBP18.1■□□□□ 0.49
SMC4-216ENST00000485645 STPG1Q5TH74 334 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 PMS2CLQ68D20 193 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 HTR3DQ70Z44 454 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 GPRIN1Q7Z2K8 1008 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 TMEM25Q86YD3 366 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 ETFBKMTQ8IXQ9 262 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 PHTF2Q8N3S3 785 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 CNTNAP3BQ96NU0 1288 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 CNTNAP3Q9BZ76 1288 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 TMEM8AQ9HCN3 771 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 PNPLA8Q9NP80 782 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 CYLDQ9NQC7 956 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 PCDHA5Q9Y5H7 936 aa18.1■□□□□ 0.49
SMC4-216ENST00000485645 HHLA1C9JL84 531 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 CYP26A1O43174 497 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 CILPO75339 1184 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 TULP3O75386 442 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 CHRM1P11229 460 aaPredicted RBP18.09■□□□□ 0.49
SMC4-216ENST00000485645 HNRNPLP14866 589 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMC4-216ENST00000485645 GTF2H1P32780 548 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 GOLGA8FQ08AF8 430 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 GOLGA8DPQ0D2H9 430 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 KRT39Q6A163 491 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 TCEAL6Q6IPX3 200 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 TCEAL3Q969E4 200 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 KLF16Q9BXK1 252 aaPredicted RBP18.09■□□□□ 0.49
SMC4-216ENST00000485645 OSER1Q9NX31 292 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 THADAQ6YHU6 1953 aa18.09■□□□□ 0.49
SMC4-216ENST00000485645 TM4SF5O14894 197 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 BCKDHBP21953 392 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 EDRF1Q3B7T1 1238 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 ZCWPW2Q504Y3 356 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 TRMT11Q7Z4G4 463 aaKnown RBP18.08■□□□□ 0.48
SMC4-216ENST00000485645 ZNF513Q8N8E2 541 aaPredicted RBP18.08■□□□□ 0.48
SMC4-216ENST00000485645 OLIG1Q8TAK6 271 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 KCNV2Q8TDN2 545 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 SPACA7Q96KW9 195 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 GDPD2Q9HCC8 539 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 ZDHHC4Q9NPG8 344 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 BCCIPQ9P287 314 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMC4-216ENST00000485645 LSM7Q9UK45 103 aaKnown RBP18.08■□□□□ 0.48
SMC4-216ENST00000485645 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.48
SMC4-216ENST00000485645 NUP205Q92621 2012 aa18.08■□□□□ 0.48
SMC4-216ENST00000485645 A0A1W2PQH9 124 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 GREM1O60565 184 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 ADAM23O75077 832 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 RARGP13631 454 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 KIF11P52732 1056 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 MCCD1P59942 119 aaPredicted RBP18.07■□□□□ 0.48
SMC4-216ENST00000485645 ZNF394Q53GI3 561 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 C10orf76Q5T2E6 689 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
SMC4-216ENST00000485645 KLHDC10Q6PID8 442 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 CYP2U1Q7Z449 544 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 PGBD3Q8N328 593 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 TERB1Q8NA31 727 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 HMGB4Q8WW32 186 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 FAXDC2Q96IV6 333 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 HEXIM2Q96MH2 286 aaKnown RBP18.07■□□□□ 0.48
SMC4-216ENST00000485645 XPO6Q96QU8 1125 aaKnown RBP18.07■□□□□ 0.48
SMC4-216ENST00000485645 EDEM2Q9BV94 578 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 DUSP16Q9BY84 665 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 NMUR1Q9HB89 426 aa18.07■□□□□ 0.48
SMC4-216ENST00000485645 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMC4-216ENST00000485645 TCRBV21S2A2A0A5A6 115 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 NEDD8-MDP1E9PL57 170 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 CETN3O15182 167 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 MAP3K13O43283 966 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 STX10O60499 249 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 EPB41P11171 864 aaKnown RBP18.06■□□□□ 0.48
SMC4-216ENST00000485645 P2RY2P41231 377 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 DHPSP49366 369 aaPredicted RBP18.06■□□□□ 0.48
SMC4-216ENST00000485645 PSEN1P49768 467 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 MXI1P50539 228 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
SMC4-216ENST00000485645 C10orf120Q5SQS8 335 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 GRAMD4Q6IC98 578 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 TPGS1Q6ZTW0 290 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 TADA2BQ86TJ2 420 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 SMYD4Q8IYR2 804 aaPredicted RBP18.06■□□□□ 0.48
SMC4-216ENST00000485645 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 FBXL13Q8NEE6 735 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 RLN3Q8WXF3 142 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 EEF2KMTQ96G04 330 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 BBS2Q9BXC9 721 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 DNAJC17Q9NVM6 304 aaKnown RBP18.06■□□□□ 0.48
SMC4-216ENST00000485645 WDR35Q9P2L0 1181 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 DNMT3LQ9UJW3 386 aa18.06■□□□□ 0.48
SMC4-216ENST00000485645 NAGPAQ9UK23 515 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 374.8 ms