RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 MBD1Q9UIS9 605 aaPredicted RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 HCN2Q9UL51 889 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 TRAF3IP3Q9Y228 551 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 MYO18AQ92614 2054 aaKnown RBP20.32■□□□□ 0.84
COL27A1-205ENST00000485397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 HHLA1C9JL84 531 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 GIPC1O14908 333 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 MAP3K13O43283 966 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 TRIM49P0CI25 452 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 TRIM49CP0CI26 452 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 GCLMP48507 274 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 VAMP7P51809 220 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 IRX4P78413 519 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 MAP7D1Q3KQU3 841 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 C10orf76Q5T2E6 689 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 CLEC20AQ6ZU45 233 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 TMEFF1Q8IYR6 380 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 ZNF513Q8N8E2 541 aaPredicted RBP20.32■□□□□ 0.84
COL27A1-205ENST00000485397 HNRNPABQ99729 332 aaKnown RBP20.32■□□□□ 0.84
COL27A1-205ENST00000485397 MAPK8IP1Q9UQF2 711 aa20.32■□□□□ 0.84
COL27A1-205ENST00000485397 MAP1BP46821 2468 aaKnown RBP20.31■□□□□ 0.84
COL27A1-205ENST00000485397 CDX4O14627 284 aaPredicted RBP20.31■□□□□ 0.84
COL27A1-205ENST00000485397 CYP26A1O43174 497 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 MYL1P05976 194 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 WASP42768 502 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 PTGER3P43115 390 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 NOVA1P51513 510 aaKnown RBP20.31■□□□□ 0.84
COL27A1-205ENST00000485397 PPP3CAQ08209 521 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 INCA1Q0VD86 236 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 DAB2IPQ5VWQ8 1189 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 HTR3DQ70Z44 454 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 LPCAT2Q7L5N7 544 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 MIB1Q86YT6 1006 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 TERB1Q8NA31 727 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 TAS1R2Q8TE23 839 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 CYFIP2Q96F07 1278 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 SPACA7Q96KW9 195 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 MMRN2Q9H8L6 949 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 NMUR1Q9HB89 426 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 TMEM9BQ9NQ34 198 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 CYLDQ9NQC7 956 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 NUDT5Q9UKK9 219 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 SCML2Q9UQR0 700 aa20.31■□□□□ 0.84
COL27A1-205ENST00000485397 MDM4O15151 490 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 ACO1P21399 889 aaKnown RBP20.3■□□□□ 0.84
COL27A1-205ENST00000485397 NR2F2P24468 414 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 ATP5C1P36542 298 aaKnown RBP20.3■□□□□ 0.84
COL27A1-205ENST00000485397 SYKP43405 635 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 NDUFA8P51970 172 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 GRAMD4Q6IC98 578 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 TPGS1Q6ZTW0 290 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 NT5C1AQ9BXI3 368 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 TMEM74BQ9NUR3 256 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 DNAJC17Q9NVM6 304 aaKnown RBP20.3■□□□□ 0.84
COL27A1-205ENST00000485397 ZDHHC9Q9Y397 364 aa20.3■□□□□ 0.84
COL27A1-205ENST00000485397 MYH10P35580 1976 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 A0A1W2PQH9 124 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 NEDD8-MDP1E9PL57 170 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 MAPK13O15264 365 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 RARGP13631 454 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 CD58P19256 250 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 SHC2P98077 582 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 PREPLQ4J6C6 727 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-205ENST00000485397 TRIM61Q5EBN2 209 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 EGFLAMQ63HQ2 1017 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 TRMT11Q7Z4G4 463 aaKnown RBP20.29■□□□□ 0.84
COL27A1-205ENST00000485397 KCNV2Q8TDN2 545 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 ERLEC1Q96DZ1 483 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 ACOX2Q99424 681 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 BBS2Q9BXC9 721 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 IMPG2Q9BZV3 1241 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 CYP3A43Q9HB55 503 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 CHD8Q9HCK8 2581 aa20.29■□□□□ 0.84
COL27A1-205ENST00000485397 CILPO75339 1184 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 KIF20AO95235 890 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 HOXB2P14652 356 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 TYRP14679 529 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 GABRG2P18507 467 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 TRIM21P19474 475 aaKnown RBP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 NTSR1P30989 418 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 KRT85P78386 507 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 DPYDQ12882 1025 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 NFIL3Q16649 462 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 UAP1L1Q3KQV9 507 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 SH3PXD2AQ5TCZ1 1133 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 TOGARAM2Q6ZUX3 1019 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 NUDT18Q6ZVK8 323 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 INTS8Q75QN2 995 aaKnown RBP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 FAM186BQ8IYM0 893 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 DEFB119Q8N690 84 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 CCDC47Q96A33 483 aaKnown RBP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 NIF3L1Q9GZT8 377 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 EVLQ9UI08 416 aaPredicted RBP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 LSM7Q9UK45 103 aaKnown RBP20.28■□□□□ 0.84
COL27A1-205ENST00000485397 STARD13Q9Y3M8 1113 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 GON4LQ3T8J9 2241 aa20.28■□□□□ 0.84
COL27A1-205ENST00000485397 ATXN2Q99700 1313 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms