RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 GDAP1L1Q96MZ0 367 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 OSBPL9Q96SU4 736 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 GDF3Q9NR23 364 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
DDX56-212ENST00000485367 TICRRQ7Z2Z1 1910 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 F5P12259 2224 aa11.32□□□□□ -0.6
DDX56-212ENST00000485367 GRID2IPA4D2P6 1211 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ANKRD33BA6NCL7 494 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 DPYSL4O14531 572 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PJA2O43164 708 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ATP2C2O75185 946 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 GLULP15104 373 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 LMO2P25791 158 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 CASP4P49662 377 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 PREPLQ4J6C6 727 aaPredicted RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 CFAP58Q5T655 872 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ZNF852Q6ZMS4 543 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 GIMAP7Q8NHV1 300 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 KBTBD7Q8WVZ9 684 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ZIM3Q96PE6 472 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 TASP1Q9H6P5 420 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 LTB4R2Q9NPC1 389 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 NCANO14594 1321 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 NUP210Q8TEM1 1887 aaPredicted RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 MACROD2A1Z1Q3 448 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 TTC36A6NLP5 189 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 FAM107AO95990 144 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 NR3C1P04150 777 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 NR1D1P20393 614 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 WARSP23381 471 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 MYL6P60660 151 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 TNNC1P63316 161 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PDCLQ13371 301 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 WDR72Q3MJ13 1102 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 CFAP221Q4G0U5 840 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 LRIG3Q6UXM1 1119 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 LIMS2Q7Z4I7 341 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 FRMD5Q7Z6J6 570 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 PLEKHO2Q8TD55 490 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 ZNF473Q8WTR7 871 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 ARL8AQ96BM9 186 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 NELL2Q99435 816 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 BCO2Q9BYV7 579 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 EDEM3Q9BZQ6 932 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 CDH9Q9ULB4 789 aa11.31□□□□□ -0.6
DDX56-212ENST00000485367 MRPS17Q9Y2R5 130 aaKnown RBP11.31□□□□□ -0.6
DDX56-212ENST00000485367 DENND4CQ5VZ89 1909 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 PDXKO00764 312 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 RASSF9O75901 435 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 CCNE1P24864 410 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 GNL1P36915 607 aaPredicted RBP11.3□□□□□ -0.6
DDX56-212ENST00000485367 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
DDX56-212ENST00000485367 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 IFFO1Q0D2I5 559 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 BIRC3Q13489 604 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 SKIDA1Q1XH10 827 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 TSEN2Q8NCE0 465 aaKnown RBP11.3□□□□□ -0.6
DDX56-212ENST00000485367 OR6B3Q8NGW1 331 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 CSGALNACT1Q8TDX6 532 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 LRRC3BQ96PB8 259 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 OSBPL6Q9BZF3 934 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 KLC4Q9NSK0 619 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
DDX56-212ENST00000485367 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
DDX56-212ENST00000485367 MAPK8IP1Q9UQF2 711 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms