RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 DNAH14Q0VDD8 3507 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 CACNA1AO00555 2505 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 SDK1Q7Z5N4 2213 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 A0A0A0MRY4 1105 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 A0A1W2PQH9 124 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 HOXC11O43248 304 aaPredicted RBP16.73■□□□□ 0.27
SIK3-211ENST00000485363 FOXD2O60548 495 aaPredicted RBP16.73■□□□□ 0.27
SIK3-211ENST00000485363 RARGP13631 454 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 GRIA2P42262 883 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 DGKEP52429 567 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 RAD23BP54727 409 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 SLC8A3P57103 927 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 WBP2Q969T9 261 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 METTL14Q9HCE5 456 aaKnown RBP16.73■□□□□ 0.27
SIK3-211ENST00000485363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
SIK3-211ENST00000485363 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 MAN1B1Q9UKM7 699 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.73■□□□□ 0.27
SIK3-211ENST00000485363 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
SIK3-211ENST00000485363 RALAP11233 206 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 TNFRSF4P43489 277 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 PLA2G4AP47712 749 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 YWHAEP62258 255 aaKnown RBP16.72■□□□□ 0.27
SIK3-211ENST00000485363 KDSRQ06136 332 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 CUL2Q13617 745 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 CRY1Q16526 586 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 ANO4Q32M45 955 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 HSF5Q4G112 596 aaPredicted RBP16.72■□□□□ 0.27
SIK3-211ENST00000485363 C10orf120Q5SQS8 335 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 PRR23CQ6ZRP0 262 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 NUDT18Q6ZVK8 323 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 KBTBD6Q86V97 674 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 TMEM25Q86YD3 366 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 ETFBKMTQ8IXQ9 262 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 CCDC33Q8N5R6 958 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 NAT16Q8N8M0 369 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 ZC3H10Q96K80 434 aaKnown RBP16.72■□□□□ 0.27
SIK3-211ENST00000485363 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 CDK5RAP1Q96SZ6 601 aaKnown RBP16.72■□□□□ 0.27
SIK3-211ENST00000485363 DEC1Q9P2X7 70 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 DNMT3LQ9UJW3 386 aa16.72■□□□□ 0.27
SIK3-211ENST00000485363 TBC1D3BA6NDS4 549 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 ANTXRLA6NF34 631 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 GREM1O60565 184 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 TULP3O75386 442 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 EPN2O95208 641 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 TIE1P35590 1138 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 SCD5Q86SK9 330 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 SFTPA1Q8IWL2 248 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 PHTF2Q8N3S3 785 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 ZNF276Q8N554 614 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 ALLCQ8N6M5 410 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 ANKRD52Q8NB46 1076 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 RTKNQ9BST9 563 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 ARRDC1-AS1Q9H2J1 176 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 NUDT5Q9UKK9 219 aa16.71■□□□□ 0.27
SIK3-211ENST00000485363 MYO18AQ92614 2054 aaKnown RBP16.71■□□□□ 0.27
SIK3-211ENST00000485363 MDM4O15151 490 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 RHOBTB1O94844 696 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 KLF8O95600 359 aaPredicted RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 KIR2DL1P43626 348 aaPredicted RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 FMO5P49326 533 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 ATXN1P54253 815 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 LRMPQ12912 555 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 ELF2Q15723 593 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 PLK5Q496M5 336 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 USP39Q53GS9 565 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 EOGTQ5NDL2 527 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 EMC10Q5UCC4 262 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 ANO7Q6IWH7 933 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 PIGZQ86VD9 579 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 ARHGAP18Q8N392 663 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 IL17RCQ8NAC3 791 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 TXNDC5Q8NBS9 432 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 BBS2Q9BXC9 721 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 DUSP15Q9H1R2 295 aaPredicted RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 POLMQ9NP87 494 aaPredicted RBP16.7■□□□□ 0.26
SIK3-211ENST00000485363 WDR35Q9P2L0 1181 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
SIK3-211ENST00000485363 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.69■□□□□ 0.26
SIK3-211ENST00000485363 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
SIK3-211ENST00000485363 NEDD8-MDP1E9PL57 170 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms