RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TTC39CQ8N584 583 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TAS1R2Q8TE23 839 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 FAM49BQ9NUQ9 324 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 WDR35Q9P2L0 1181 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
SCFD1-206ENST00000484733 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
SCFD1-206ENST00000484733 BCKDHBP21953 392 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 GBP1P32455 592 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 DPP6P42658 865 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 GCLMP48507 274 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 PSEN1P49768 467 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 KDSRQ06136 332 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 ADAM9Q13443 819 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 EDRF1Q3B7T1 1238 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 RNF43Q68DV7 783 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 NACA2Q9H009 215 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 SMOC1Q9H4F8 434 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 EVLQ9UI08 416 aaPredicted RBP12.09□□□□□ -0.47
SCFD1-206ENST00000484733 INVSQ9Y283 1065 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 MYH10P35580 1976 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 NUP205Q92621 2012 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 TBC1D3BA6NDS4 549 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 ADORA2BP29275 332 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 KRT39Q6A163 491 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 GPRIN1Q7Z2K8 1008 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 TERB1Q8NA31 727 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC150Q8NCX0 1101 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 SPACA7Q96KW9 195 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 DUSP16Q9BY84 665 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCFD1-206ENST00000484733 OSER1Q9NX31 292 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 LSM7Q9UK45 103 aaKnown RBP12.09□□□□□ -0.47
SCFD1-206ENST00000484733 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
SCFD1-206ENST00000484733 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 THADAQ6YHU6 1953 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CACNG3O60359 315 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 STX10O60499 249 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF202O95125 648 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TRIM49P0CI25 452 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TRIM49CP0CI26 452 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 PMLP29590 882 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 KIF11P52732 1056 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 N4BP2L1Q5TBK1 243 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 Q6ZNB5 142 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CYP2U1Q7Z449 544 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TADA2BQ86TJ2 420 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CDK5RAP1Q96SZ6 601 aaKnown RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 EDEM2Q9BV94 578 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.483e-6■■■■■ 28.8
SCFD1-206ENST00000484733 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 DNAH14Q0VDD8 3507 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CYP26A1O43174 497 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TBX18O95935 607 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 IRF1P10914 325 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 RARGP13631 454 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 SHC2P98077 582 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 ANO4Q32M45 955 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 COBLL1Q53SF7 1204 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TCEAL6Q6IPX3 200 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 NAT16Q8N8M0 369 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CHAMP1Q96JM3 812 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 NMUR1Q9HB89 426 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 MBD1Q9UIS9 605 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-206ENST00000484733 DNMT3LQ9UJW3 386 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
SCFD1-206ENST00000484733 A0A1W2PQH9 124 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 KCNK5O95279 499 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
SCFD1-206ENST00000484733 NTSR1P30989 418 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 C10orf76Q5T2E6 689 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 PEAR1Q5VY43 1037 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-206ENST00000484733 SCD5Q86SK9 330 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 ZNF513Q8N8E2 541 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-206ENST00000484733 FBXO10Q9UK96 956 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
SCFD1-206ENST00000484733 TCRBV21S2A2A0A5A6 115 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 CISD3P0C7P0 127 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 DHPSP49366 369 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-206ENST00000484733 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-206ENST00000484733 DAB2IPQ5VWQ8 1189 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 SLC36A4Q6YBV0 504 aa12.06□□□□□ -0.48
SCFD1-206ENST00000484733 ZC3H3Q8IXZ2 948 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms