RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
UPF3A-208ENST00000484246 TEX33O43247 280 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 AOC1P19801 751 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 RGS7P49802 495 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 NUBP1P53384 320 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ZNF445P59923 1031 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 NR1I3Q14994 352 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 EML3Q32P44 896 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ASTLQ6HA08 431 aaPredicted RBP16.67■□□□□ 0.26
UPF3A-208ENST00000484246 MSANTD2Q6P1R3 559 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 TPRG1Q6ZUI0 275 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ZNF677Q86XU0 584 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ATP2A3Q93084 1043 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 OTUB2Q96DC9 234 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 ZFYVE19Q96K21 471 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 MFSD1Q9H3U5 465 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 OLA1Q9NTK5 396 aaKnown RBP16.67■□□□□ 0.26
UPF3A-208ENST00000484246 SMPD4Q9NXE4 827 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 CFAP97Q9P2B7 532 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 PIAS3Q9Y6X2 628 aa16.67■□□□□ 0.26
UPF3A-208ENST00000484246 KANSL1LA0AUZ9 987 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 YJEFN3A6XGL0 299 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 E7ENQ6 273 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 GREM1O60565 184 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 CTHP32929 405 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 STAT1P42224 750 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 IFNAR2P48551 515 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 FANCCQ00597 558 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 RUNX3Q13761 415 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 ITPRIPL2Q3MIP1 535 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 BSPRYQ5W0U4 402 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 ZNF852Q6ZMS4 543 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NOP9Q86U38 636 aaKnown RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NOX5Q96PH1 765 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NELL2Q99435 816 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 TRIM62Q9BVG3 475 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NACA2Q9H009 215 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 LTB4R2Q9NPC1 389 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 ABCC13Q9NSE7 274 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 DUS2Q9NX74 493 aaKnown RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 NOCTQ9UK39 431 aaKnown RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 MRPS17Q9Y2R5 130 aaKnown RBP16.66■□□□□ 0.26
UPF3A-208ENST00000484246 CEP83Q9Y592 693 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
UPF3A-208ENST00000484246 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-208ENST00000484246 NFATC1O95644 943 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 TBX18O95935 607 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 SERPINC1P01008 464 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 LCP1P13796 627 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 ARSAP15289 507 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 KRT9P35527 623 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 PBX1P40424 430 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 TNK2Q07912 1038 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 FIGNQ5HY92 759 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 C10orf120Q5SQS8 335 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 HTR3DQ70Z44 454 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 CPA6Q8N4T0 437 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-208ENST00000484246 EDEM3Q9BZQ6 932 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 GTSE1Q9NYZ3 720 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 WNT6Q9Y6F9 365 aa16.65■□□□□ 0.26
UPF3A-208ENST00000484246 E5RJQ4 531 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 SPECC1L-ADORA2AF8WAN1 911 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 GFPT2O94808 682 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 LTFP02788 710 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 GLI1P08151 1106 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 AVPR2P30518 371 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 MAGEA9P43362 315 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 VCPP55072 806 aaKnown RBP16.64■□□□□ 0.25
UPF3A-208ENST00000484246 COG7P83436 770 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 CDR2Q01850 454 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 BTBD8Q5XKL5 378 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 TRIM68Q6AZZ1 485 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 Q6ZNB5 142 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 TMEM105Q8N8V8 129 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 TMEM35BQ8NCS4 154 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 C1orf131Q8NDD1 294 aaKnown RBP16.64■□□□□ 0.25
UPF3A-208ENST00000484246 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 BAP1Q92560 729 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
UPF3A-208ENST00000484246 CHFRQ96EP1 664 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 CPXM1Q96SM3 734 aa16.64■□□□□ 0.25
UPF3A-208ENST00000484246 KCNH6Q9H252 994 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms