RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FASNP49327 2511 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 VWA8A3KMH1 1905 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 MIA3Q5JRA6 1907 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 NCANO14594 1321 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 VWA3AA6NCI4 1184 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 K7ENM7 598 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 K7ESF4 209 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SLC26A4O43511 780 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ATG13O75143 517 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 DEAF1O75398 565 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 VNN2O95498 520 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 PIGRP01833 764 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 AMPD1P23109 780 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 HOXA6P31267 233 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 CD68P34810 354 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 TNFSF9P41273 254 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 DGKGP49619 791 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 MCM2P49736 904 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 GUCY2FP51841 1108 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SLC12A3P55017 1021 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 NLRP12P59046 1061 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 LILRA4P59901 499 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ATP2C1P98194 919 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 AMPD2Q01433 879 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 DMWDQ09019 674 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SMARCB1Q12824 385 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 GRSF1Q12849 480 aaKnown RBP eCLIP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SRSF5Q13243 272 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM132DQ14C87 1099 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 PON2Q15165 354 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 IL17AQ16552 155 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ITPRIPL2Q3MIP1 535 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 AASDHQ4L235 1098 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 STXBP5Q5T5C0 1151 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SPATA1Q5VX52 437 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ARL6IP4Q66PJ3 421 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 LYPD4Q6UWN0 246 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 Q6ZS52 159 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 WDR5BQ86VZ2 330 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 GPBP1Q86WP2 473 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 THEM5Q8N1Q8 247 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 MYCT1Q8N699 235 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 C12orf50Q8NA57 414 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 RASSF8Q8NHQ8 419 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 TTC8Q8TAM2 541 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 C2orf15Q8WU43 125 aaKnown RBP6.33□□□□□ -1.4
CSDE1-207ENST00000483407 KCNN1Q92952 543 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 EXOC4Q96A65 974 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 RSPRY1Q96DX4 576 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 CALML4Q96GE6 196 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 CHAMP1Q96JM3 812 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ZFYVE19Q96K21 471 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SENP8Q96LD8 212 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM209Q96SK2 561 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 PLIN2Q99541 437 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 MSTO1Q9BUK6 570 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 PARVGQ9HBI0 331 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 GTSE1Q9NYZ3 720 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 TBX20Q9UMR3 447 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 SLC8A2Q9UPR5 921 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 DERAQ9Y315 318 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 MSRB2Q9Y3D2 182 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 FANCMQ8IYD8 2048 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 DOCK6Q96HP0 2047 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF292O60281 2723 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 CEP250Q9BV73 2442 aa6.33□□□□□ -1.4
CSDE1-207ENST00000483407 F5P12259 2224 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 A0A0B4J269 797 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CCDC163A0A0D9SF12 145 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 NPHP3-ACAD11A0A0J9YXS1 232 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 H3BQV1 296 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CYB561D2O14569 222 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TBCAO75347 108 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 SOAT2O75908 522 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 HTR3BO95264 441 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 DLGAP3O95886 979 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ADRB2P07550 413 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CCDC192P0DO97 292 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 AVPR1AP37288 418 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 UBA7P41226 1012 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TAF6P49848 677 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 CYP4F8P98187 520 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 RING1Q06587 406 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TNK2Q07912 1038 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 BFSP1Q12934 665 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 DHX8Q14562 1220 aaKnown RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 ST3GAL2Q16842 350 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM119Q4V9L6 283 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 SLC39A12Q504Y0 691 aa6.32□□□□□ -1.4
CSDE1-207ENST00000483407 C9orf57Q5W0N0 161 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms