RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 FAM183BPQ6ZVS7 135 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 FAM193BQ96PV7 902 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 PLEKHG4BQ96PX9 1271 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TRIM4Q9C037 500 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 MIS12Q9H081 205 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 CRTAC1Q9NQ79 661 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 FNDC1Q4ZHG4 1894 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 MYBPHLA2RUH7 354 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TMEM191CA6NGB0 347 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 PROSCO94903 275 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 CLTBP09497 229 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 RARAP10276 462 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 LCP1P13796 627 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TCF4P15884 667 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ITGB8P26012 769 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ECHS1P30084 290 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 RFC1P35251 1148 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 TAS2R40P59535 323 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ATP11AP98196 1134 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ZNF252P-AS1Q0IIN9 211 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TAF5Q15542 800 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ODF2Q5BJF6 829 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 PPP1R15BQ5SWA1 713 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 C1QTNF12Q5T7M4 302 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 NUGGCQ68CJ6 796 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ARHGAP17Q68EM7 881 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 PPP1R2P3Q6NXS1 205 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 DCLRE1AQ6PJP8 1040 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TMCO2Q7Z6W1 182 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ABI1Q8IZP0 508 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 PIWIL1Q96J94 861 aaKnown RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 PBKQ96KB5 322 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 CASD1Q96PB1 797 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TMEM209Q96SK2 561 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 AP1M1Q9BXS5 423 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 B3GNT5Q9BYG0 378 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 RHOBTB2Q9BYZ6 727 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
APTX-225ENST00000482687 ARHGEF3Q9NR81 526 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TMEM59LQ9UK28 342 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
APTX-225ENST00000482687 TBKBP1A7MCY6 615 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 F8VP50 259 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 GABRDO14764 452 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 INPPL1O15357 1258 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 BEST1O76090 585 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 OAS1P00973 400 aaKnown RBP10.86□□□□□ -0.67
APTX-225ENST00000482687 CXCL10P02778 98 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 ODC1P11926 461 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 KRT3P12035 628 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 ATP6V1C1P21283 382 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 GBP1P32455 592 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 PBX3P40426 434 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 SKIV2L2P42285 1042 aaKnown RBP10.86□□□□□ -0.67
APTX-225ENST00000482687 PEX5P50542 639 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 STILQ15468 1287 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 FAM102AQ5T9C2 384 aaPredicted RBP10.86□□□□□ -0.67
APTX-225ENST00000482687 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 FAM117BQ6P1L5 589 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 PAQR9Q6ZVX9 377 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 MIPOL1Q8TD10 442 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 CLEC4CQ8WTT0 213 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 NDRG1Q92597 394 aaKnown RBP10.86□□□□□ -0.67
APTX-225ENST00000482687 CD101Q93033 1021 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 TNIP3Q96KP6 325 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 UROC1Q96N76 676 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 KLHL11Q9NVR0 708 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.67
APTX-225ENST00000482687 STRIP2Q9ULQ0 834 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 NOVA2Q9UNW9 492 aaKnown RBP10.86□□□□□ -0.67
APTX-225ENST00000482687 PCDHGA4Q9Y5G9 962 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 TTC3P53804 2025 aa10.86□□□□□ -0.67
APTX-225ENST00000482687 ESYT3A0FGR9 886 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 TRIM43BA6NCK2 446 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 ZSCAN5CA6NGD5 496 aaPredicted RBP10.85□□□□□ -0.67
APTX-225ENST00000482687 NT5C1B-RDH14C9J2C7 533 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 FAM163BP0C2L3 166 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 PYGMP11217 842 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 ACADSP16219 412 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 GNAZP19086 355 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 RANBP1P43487 201 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 MAGOHP61326 146 aaKnown RBP10.85□□□□□ -0.67
APTX-225ENST00000482687 KCNJ2P63252 427 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 DSC1Q08554 894 aa10.85□□□□□ -0.67
APTX-225ENST00000482687 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms