RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CBWD5Q5RIA9 395 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 FAM160B1Q5W0V3 765 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 IQSEC1Q6DN90 963 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ABHD15Q6UXT9 468 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ANO5Q75V66 913 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 DAAM2Q86T65 1068 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 FAM71AQ8IYT1 594 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 GPD1LQ8N335 351 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 FBXL13Q8NEE6 735 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX13-208ENST00000482558 TRIM63Q969Q1 353 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 LRRC45Q96CN5 670 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 HES6Q96HZ4 224 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 LRGUKQ96M69 825 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 NT5C1BQ96P26 610 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 LRRC1Q9BTT6 524 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 FAM129AQ9BZQ8 928 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ISCUQ9H1K1 167 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 UBE2TQ9NPD8 197 aaPredicted RBP8.18□□□□□ -1.1
SNX13-208ENST00000482558 PDLIM7Q9NR12 457 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 CYP26B1Q9NR63 512 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 C1orf112Q9NSG2 853 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX13-208ENST00000482558 CWC15Q9P013 229 aaKnown RBP8.18□□□□□ -1.1
SNX13-208ENST00000482558 GMIPQ9P107 970 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.18□□□□□ -1.1
SNX13-208ENST00000482558 UVRAGQ9P2Y5 699 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 KLHL3Q9UH77 587 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 HPCAL4Q9UM19 191 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 SLC45A1Q9Y2W3 748 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
SNX13-208ENST00000482558 TMCO5BA8MYB1 307 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 K7ESF4 209 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 FOXN3O00409 490 aaPredicted RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 CXCL11O14625 94 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 EXTL3O43909 919 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ATP9AO75110 1047 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 PRKD3O94806 890 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ERLIN2O94905 339 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 FTCDO95954 541 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 LTFP02788 710 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 IVLP07476 585 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 TRIM49P0CI25 452 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 TRIM49CP0CI26 452 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 MYBL1P10243 752 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 NF2P35240 595 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 NAMPTP43490 491 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ID4P47928 161 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 EFNA5P52803 228 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ACTR2P61160 394 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 PPATQ06203 517 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 MESP2Q0VG99 397 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 GRM1Q13255 1194 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 SURF1Q15526 300 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 SV2CQ496J9 727 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 YOD1Q5VVQ6 348 aaPredicted RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 SWSAP1Q6NVH7 229 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 UNC5AQ6ZN44 842 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 NT5DC3Q86UY8 548 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 CBARPQ8N350 705 aaPredicted RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 SLC35G2Q8TBE7 412 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 SCFD2Q8WU76 684 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 MAIP1Q8WWC4 291 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 POMGNT1Q8WZA1 660 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 CCT6BQ92526 530 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 SHC3Q92529 594 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ZKSCAN4Q969J2 545 aaPredicted RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 GPR88Q9GZN0 384 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 RAB17Q9H0T7 212 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 A1CFQ9NQ94 594 aaKnown RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 ZNF302Q9NR11 478 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 FAM114A2Q9NRY5 505 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ADARB2Q9NS39 739 aaKnown RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 TRMT13Q9NUP7 481 aaKnown RBP8.17□□□□□ -1.1
SNX13-208ENST00000482558 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ARHGAP28Q9P2N2 729 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ADAM21Q9UKJ8 722 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 ADAMTS6Q9UKP5 1117 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 STYXL1Q9Y6J8 313 aa8.17□□□□□ -1.1
SNX13-208ENST00000482558 IGKV6D-21A0A0A0MT36 114 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 LRRIQ3A6PVS8 624 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 J3KRW8 73 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 KRIT1O00522 736 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 HNRNPDLO14979 420 aaKnown RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 POLR3GO15318 223 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 NCK2O43639 380 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CEP104O60308 925 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 RNGTTO60942 597 aaKnown RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 EFCAB14O75071 495 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 HEXIM1O94992 359 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms