RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PRKCSHP14314 528 aaPredicted RBP17.4■□□□□ 0.38
VAMP4-204ENST00000482519 SLC9A1P19634 815 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 USP8P40818 1118 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 RGS7P49802 495 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
VAMP4-204ENST00000482519 APBA1Q02410 837 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 ADIGQ0VDE8 80 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 EFEMP1Q12805 493 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 RAB41Q5JT25 222 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 LY6G5CQ5SRR4 150 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 HEATR6Q6AI08 1181 aaKnown RBP17.4■□□□□ 0.38
VAMP4-204ENST00000482519 TRIM65Q6PJ69 517 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 RHBDF2Q6PJF5 856 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 LCLAT1Q6UWP7 414 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 MAMSTRQ6ZN01 415 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 SIX6OS1Q8N1H7 587 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 ARHGAP18Q8N392 663 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 KIAA1958Q8N8K9 716 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 ZSWIM1Q9BR11 485 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 ULBP1Q9BZM6 244 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 C2orf42Q9NWW7 574 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 ZSCAN32Q9NX65 697 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 CLIC5Q9NZA1 410 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 RASAL2Q9UJF2 1139 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 PES1O00541 588 aaKnown RBP17.39■□□□□ 0.37
VAMP4-204ENST00000482519 HMBSP08397 361 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 ADH5P11766 374 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 OPRD1P41143 372 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 PLA2G4AP47712 749 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 SLC6A11P48066 632 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 NRLP54845 237 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 MFAP3P55082 362 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 CNGA2Q16280 664 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 ARHGAP44Q17R89 818 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 EXOC3L4Q17RC7 722 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 ANO4Q32M45 955 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 PKN3Q6P5Z2 889 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 SECISBP2LQ93073 1101 aaKnown RBP17.39■□□□□ 0.37
VAMP4-204ENST00000482519 OTUB2Q96DC9 234 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 CDK5RAP1Q96SZ6 601 aaKnown RBP17.39■□□□□ 0.37
VAMP4-204ENST00000482519 LSM7Q9UK45 103 aaKnown RBP17.39■□□□□ 0.37
VAMP4-204ENST00000482519 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.39■□□□□ 0.37
VAMP4-204ENST00000482519 PCDHGA2Q9Y5H1 932 aa17.39■□□□□ 0.37
VAMP4-204ENST00000482519 WDR87Q6ZQQ6 2873 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 ATG13O75143 517 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 LMNAP02545 664 aaKnown RBP17.38■□□□□ 0.37
VAMP4-204ENST00000482519 PON1P27169 355 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 ZNF132P52740 706 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 SEC13P55735 322 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 STILQ15468 1287 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 MAN2A1Q16706 1144 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 GAB4Q2WGN9 574 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 BTBD8Q5XKL5 378 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 KLHDC10Q6PID8 442 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 SASS6Q6UVJ0 657 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 HTR3DQ70Z44 454 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 NAT16Q8N8M0 369 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 RPLP0P6Q8NHW5 317 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 TUBGCP2Q9BSJ2 902 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 SEMA4AQ9H3S1 761 aa17.38■□□□□ 0.37
VAMP4-204ENST00000482519 SAMSN1Q9NSI8 373 aaKnown RBP17.38■□□□□ 0.37
VAMP4-204ENST00000482519 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
VAMP4-204ENST00000482519 CHURC1-FNTBB4DL54 471 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 LETM1O95202 739 aaPredicted RBP17.37■□□□□ 0.37
VAMP4-204ENST00000482519 TDGF1P13385 188 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 HOXC13P31276 330 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 FNTBP49356 437 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 GAD2Q05329 585 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 KDSRQ06136 332 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 DMWDQ09019 674 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 FBXO43Q4G163 708 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 VWA3BQ502W6 1294 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 PKDCCQ504Y2 493 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 C2orf27AQ580R0 203 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 PM20D1Q6GTS8 502 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 PMF1Q6P1K2 205 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 TPGS1Q6ZTW0 290 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 ENOSF1Q7L5Y1 443 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 C12orf40Q86WS4 652 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 TMEM25Q86YD3 366 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 EDEM1Q92611 657 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 EZH1Q92800 747 aaPredicted RBP17.37■□□□□ 0.37
VAMP4-204ENST00000482519 PNKPQ96T60 521 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 HINFPQ9BQA5 517 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 FAM126AQ9BYI3 521 aaPredicted RBP17.37■□□□□ 0.37
VAMP4-204ENST00000482519 NDST4Q9H3R1 872 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 SPHK2Q9NRA0 654 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 MARCH2Q9P0N8 246 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 APEX2Q9UBZ4 518 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 STRIP2Q9ULQ0 834 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 SLC8A2Q9UPR5 921 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
VAMP4-204ENST00000482519 SLC12A8A0AV02 714 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 YJEFN3A6XGL0 299 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 E7ENQ6 273 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 THAP12O43422 761 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms