RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 TIGD1Q96MW7 591 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 KLF16Q9BXK1 252 aaPredicted RBP23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 DUSP16Q9BY84 665 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 TPSD1Q9BZJ3 242 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 NMUR1Q9HB89 426 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 CYLDQ9NQC7 956 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 SPHK2Q9NRA0 654 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 NAGPAQ9UK23 515 aa23.41■■□□□ 1.34
GPCPD1-206ENST00000481690 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 MDM4O15151 490 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 KLF8O95600 359 aaPredicted RBP23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 RARGP13631 454 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 GRIA2P42262 883 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 KIF11P52732 1056 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 LRRC63Q05C16 580 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 ANO7Q6IWH7 933 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 TMEM25Q86YD3 366 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 ALLCQ8N6M5 410 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 SLC4A11Q8NBS3 891 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 SPATA20Q8TB22 786 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 FAXDC2Q96IV6 333 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 GTPBP4Q9BZE4 634 aaKnown RBP23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 EBF1Q9UH73 591 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 LSM7Q9UK45 103 aaKnown RBP23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 THADAQ6YHU6 1953 aa23.4■■□□□ 1.34
GPCPD1-206ENST00000481690 PSMA7O14818 248 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 DCLK1O15075 740 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 HOXC11O43248 304 aaPredicted RBP23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 EPN2O95208 641 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 RAD23BP54727 409 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 C10orf120Q5SQS8 335 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 ZC3H3Q8IXZ2 948 aaKnown RBP23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 TXNDC5Q8NBS9 432 aaKnown RBP23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 LOXL4Q96JB6 756 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 RTKNQ9BST9 563 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 ZDHHC4Q9NPG8 344 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 ARMCX3Q9UH62 379 aaPredicted RBP23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 INVSQ9Y283 1065 aa23.39■■□□□ 1.33
GPCPD1-206ENST00000481690 TBC1D3BA6NDS4 549 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 TULP3O75386 442 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 GBP1P32455 592 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 ELF2Q15723 593 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 CRY1Q16526 586 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 PLK5Q496M5 336 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 AASDHQ4L235 1098 aaPredicted RBP23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 EMC10Q5UCC4 262 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 HTR3DQ70Z44 454 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 CCDC186Q7Z3E2 898 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 ETFBKMTQ8IXQ9 262 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 IL17RCQ8NAC3 791 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 NETO1Q8TDF5 533 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 DUSP9Q99956 384 aaKnown RBP23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 DEC1Q9P2X7 70 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 DNMT3LQ9UJW3 386 aa23.38■■□□□ 1.33
GPCPD1-206ENST00000481690 NUP205Q92621 2012 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 NEDD8-MDP1E9PL57 170 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 GDF9O60383 454 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 RALAP11233 206 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 LRMPQ12912 555 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 SF3A2Q15428 464 aaKnown RBP23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 PREPLQ4J6C6 727 aaPredicted RBP23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 KLHL10Q6JEL2 608 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 TPGS1Q6ZTW0 290 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 SCD5Q86SK9 330 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 TADA2BQ86TJ2 420 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 MIB1Q86YT6 1006 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 PHTF2Q8N3S3 785 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 C12orf50Q8NA57 414 aaPredicted RBP23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 MDGA1Q8NFP4 955 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 ZC3H10Q96K80 434 aaKnown RBP23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 BBS2Q9BXC9 721 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 DUSP15Q9H1R2 295 aaPredicted RBP23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 RASAL2Q9UJF2 1139 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 MAN1B1Q9UKM7 699 aa23.37■■□□□ 1.33
GPCPD1-206ENST00000481690 DCDC2BA2VCK2 349 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 SGK1O00141 431 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 FOXD2O60548 495 aaPredicted RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 GREM1O60565 184 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 ALDH1A2O94788 518 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 TNFRSF4P43489 277 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 KIR2DL1P43626 348 aaPredicted RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 PSEN1P49768 467 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 SLC8A3P57103 927 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 CUL2Q13617 745 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 GOLGA7BQ2TAP0 167 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 CCDC40Q4G0X9 1142 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 USP39Q53GS9 565 aaKnown RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 EOGTQ5NDL2 527 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 C10orf76Q5T2E6 689 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 ARHGAP17Q68EM7 881 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 KLHDC10Q6PID8 442 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 TMEM92Q6UXU6 159 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 RASSF3Q86WH2 238 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 SLC35C1Q96A29 364 aa23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 DHTKD1Q96HY7 919 aaPredicted RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 CNOT6LQ96LI5 555 aaKnown RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 FAM124BQ9H5Z6 455 aaPredicted RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 CIZ1Q9ULV3 898 aaPredicted RBP23.36■■□□□ 1.33
GPCPD1-206ENST00000481690 COQ4Q9Y3A0 265 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms