RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 TRAF2Q12933 501 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 ZDHHC20Q5W0Z9 365 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 FAM129CQ86XR2 697 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 HPS3Q969F9 1004 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 TSPAN17Q96FV3 270 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 CEP41Q9BYV8 373 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 GJB4Q9NTQ9 266 aa11.93□□□□□ -0.5
TRIM27-205ENST00000481474 HAUS5O94927 633 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 HLFQ16534 295 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 IZUMO3Q5VZ72 239 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 NOTUMQ6P988 496 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MPP5Q8N3R9 675 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 SMYD1Q8NB12 490 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 NMRK1Q9NWW6 199 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 A6NNZ2 444 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ZBTB5O15062 677 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 CPA2P48052 419 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 COPZ1P61923 177 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MYBPC2Q14324 1141 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TXNRD1Q16881 649 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TUBB8Q3ZCM7 444 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ANO5Q75V66 913 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 FAM45AQ8TCE6 357 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 GAL3ST1Q99999 423 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 GRIP2Q9C0E4 1043 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 LRRC4BQ9NT99 713 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TBC1D22BQ9NU19 505 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 GMFBP60983 142 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PUDPQ08623 228 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MYO1HQ8N1T3 1032 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 DCAF4Q8WV16 495 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MRPS23Q9Y3D9 190 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PBKQ96KB5 322 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 SPATA9Q9BWV2 254 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 HMX1Q9NP08 348 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 CD4P01730 458 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MADCAM1Q13477 382 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 DNAJC14Q6Y2X3 702 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 CASP10Q92851 521 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 MPP6Q9NZW5 540 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 XYLBO75191 536 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PSIP1O75475 530 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 SERPINA3P01011 423 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 P4HBP07237 508 aaKnown RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 DPEP1P16444 411 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 SERPINB5P36952 375 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 POLD2P49005 469 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 NT5C2P49902 561 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 GRSF1Q12849 480 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 NCOA4Q13772 614 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PTGISQ16647 500 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PREPLQ4J6C6 727 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-205ENST00000481474 OR2L5Q8NG80 312 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TMEM117Q9H0C3 514 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 TMEM138Q9NPI0 162 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 ADPRHL2Q9NX46 363 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 CDC23Q9UJX2 597 aa11.92□□□□□ -0.5
TRIM27-205ENST00000481474 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 IL1R1P14778 569 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 CXCR2P25025 360 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 MAGOHP61326 146 aaKnown RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 ERVK-9P63128 1117 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 CACHD1Q5VU97 1274 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 FBXO42Q6P3S6 717 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 INTS2Q9H0H0 1204 aaKnown RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 VTA1Q9NP79 307 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 MRPL40Q9NQ50 206 aaKnown RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 CCDC177Q9NQR7 707 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 ERVK-11Q9UQG0 969 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 PSMD11O00231 422 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 FAM20BO75063 409 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 LRATO95237 230 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 TOP3BO95985 862 aaKnown RBP11.91□□□□□ -0.5
TRIM27-205ENST00000481474 LYNP07948 512 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 EPORP19235 508 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 GTF2A2P52657 109 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 NDUFAF6Q330K2 333 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 PHF19Q5T6S3 580 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 RAET1GQ6H3X3 334 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 UGT3A1Q6NUS8 523 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 SERPINA13PQ6UXR4 307 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 BRSK1Q8TDC3 778 aa11.91□□□□□ -0.5
TRIM27-205ENST00000481474 HPDLQ96IR7 371 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms