RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 KREMEN2Q8NCW0 462 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 STKLD1Q8NE28 680 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 JOSD2Q8TAC2 188 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 RXFP2Q8WXD0 754 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 CD101Q93033 1021 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 FBXO32Q969P5 355 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 NAP1L3Q99457 506 aaPredicted RBP10.63□□□□□ -0.71
USP39-215ENST00000481409 TLR10Q9BXR5 811 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 RHOBTB2Q9BYZ6 727 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 PRDM16Q9HAZ2 1276 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 ZDHHC7Q9NXF8 308 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 SNX12Q9UMY4 172 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 SLC27A5Q9Y2P5 690 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 PCDHA3Q9Y5H8 950 aa10.63□□□□□ -0.71
USP39-215ENST00000481409 YJEFN3A6XGL0 299 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 ZNF487B1APH4 448 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 E7ENQ6 273 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 SEC24AO95486 1093 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 LRG1P02750 347 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 NCAM1P13591 858 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 ATF6P18850 670 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 DNAJB1P25685 340 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CA8P35219 290 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 FLT3P36888 993 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 RWDD2BP57060 319 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 RNASE9P60153 205 aaKnown RBP10.62□□□□□ -0.71
USP39-215ENST00000481409 COPS2P61201 443 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 TUBB4BP68371 445 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CAMK1Q14012 370 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CCDC14Q49A88 953 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 DCAF6Q58WW2 860 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CC2D1AQ6P1N0 951 aaPredicted RBP10.62□□□□□ -0.71
USP39-215ENST00000481409 SND1Q7KZF4 910 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP39-215ENST00000481409 DEFB106AQ8N104 65 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 SCAMP5Q8TAC9 235 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 RNF139Q8WU17 664 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 MRPL38Q96DV4 380 aaKnown RBP10.62□□□□□ -0.71
USP39-215ENST00000481409 ZNF512Q96ME7 567 aaPredicted RBP10.62□□□□□ -0.71
USP39-215ENST00000481409 NPY6RQ99463 290 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CRISPLD1Q9H336 500 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 TTC7AQ9ULT0 858 aaPredicted RBP10.62□□□□□ -0.71
USP39-215ENST00000481409 EFR3BQ9Y2G0 817 aa10.62□□□□□ -0.71
USP39-215ENST00000481409 CLUHO75153 1309 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ZNF638Q14966 1978 aaKnown RBP10.61□□□□□ -0.71
USP39-215ENST00000481409 HIDE1A8MVS5 230 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 MDM4O15151 490 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 PRPSAP2O60256 369 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
USP39-215ENST00000481409 XYLBO75191 536 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 LRCH4O75427 683 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ZMYND10O75800 440 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ARHGEF15O94989 841 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 FTCDO95954 541 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 C8AP07357 584 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 SRGAP2BP0DMP2 458 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 SLC2A3P11169 496 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 RDXP35241 583 aaKnown RBP10.61□□□□□ -0.71
USP39-215ENST00000481409 PBX2P40425 430 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 AMPD2Q01433 879 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 OGDHQ02218 1023 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 CKAP4Q07065 602 aaKnown RBP10.61□□□□□ -0.71
USP39-215ENST00000481409 ZNF252P-AS1Q0IIN9 211 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 TWF1Q12792 350 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 TAF10Q12962 218 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 DUSP6Q16828 381 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 WHAMMP3Q1A5X7 153 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ARL13BQ3SXY8 428 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 PPM1LQ5SGD2 360 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 LLGL2Q6P1M3 1020 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 PHLDB2Q86SQ0 1253 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 MAP7D3Q8IWC1 876 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 KATNAL2Q8IYT4 538 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 RCOR2Q8IZ40 523 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 TTC9BQ8N6N2 239 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 EMC1Q8N766 993 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 EXD1Q8NHP7 514 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 CLEC4CQ8WTT0 213 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 SLC22A17Q8WUG5 538 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 MAIP1Q8WWC4 291 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ARNTL2Q8WYA1 636 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 ZNF592Q92610 1267 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
USP39-215ENST00000481409 RPGRIP1Q96KN7 1286 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 CFAP57Q96MR6 1250 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 SERPINB11Q96P15 392 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 OSBPL9Q96SU4 736 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 DZANK1Q9NVP4 752 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 TRPM5Q9NZQ8 1165 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 CDC23Q9UJX2 597 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 USP18Q9UMW8 372 aa10.61□□□□□ -0.71
USP39-215ENST00000481409 MYO16Q9Y6X6 1858 aa10.6□□□□□ -0.71
USP39-215ENST00000481409 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
USP39-215ENST00000481409 PIK3R2O00459 728 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms