RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 MDH1BQ5I0G3 518 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 DENND5BQ6ZUT9 1274 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 FILIP1Q7Z7B0 1213 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 PDILTQ8N807 584 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 MYCBPAPQ8TBZ2 947 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 NXPE2Q96DL1 559 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 CEP295NLQ96MC4 621 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 USP28Q96RU2 1077 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 PNKPQ96T60 521 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 MRPL45Q9BRJ2 306 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 FAM124BQ9H5Z6 455 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 ARHGEF4Q9NR80 690 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 TMEM30AQ9NV96 361 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 SMPD4Q9NXE4 827 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 SUSD2Q9UGT4 822 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 TCHHQ07283 1943 aa10.03□□□□□ -0.8
SMARCE1-210ENST00000481231 CAPN8A6NHC0 703 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 F8VP50 259 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 ERVH48-1M5A8F1 160 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 RRP8O43159 456 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SLC28A2O43868 658 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 OLFM2O95897 454 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 HOXB2P14652 356 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 GNSP15586 552 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 NDUFV2P19404 249 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SYT1P21579 422 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 ANXA13P27216 316 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 CACNA2D1P54289 1103 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 NOP14P78316 857 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SLC7A9P82251 487 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 BNC1Q01954 994 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 LY6DQ14210 128 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SLC39A14Q15043 492 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 DHCR24Q15392 516 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SURF1Q15526 300 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SYCP2LQ5T4T6 812 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 TRAPPC11Q7Z392 1133 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 MIB1Q86YT6 1006 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 WDR49Q8IV35 697 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 MMS19Q96T76 1030 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 CDC6Q99741 560 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 ZDHHC5Q9C0B5 715 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 MIR1-1HGQ9H1L0 117 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 SNX25Q9H3E2 840 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 CFAP97Q9P2B7 532 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 CPQQ9Y646 472 aa10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 MORC2Q9Y6X9 1032 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 ZNF638Q14966 1978 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 USP9XQ93008 2570 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 GOLGA4Q13439 2230 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-210ENST00000481231 TEX15Q9BXT5 2789 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 A0A1W2PQF6 199 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 MEI4A8MW99 385 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 B8ZZF3 427 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 SLC9A3R1O14745 358 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TRIM66O15016 1216 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 FLRT2O43155 660 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 NDUFS2O75306 463 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TACC1O75410 805 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 CER1O95813 267 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 ABL1P00519 1130 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 OAS1P00973 400 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 DLATP10515 647 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 PTPN1P18031 435 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 GRIA2P42262 883 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 MATKP42679 507 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 PPP3CCP48454 512 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TLE3Q04726 772 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 CCDC173Q0VFZ6 552 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TAF10Q12962 218 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 E2F4Q16254 413 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 SNRNP35Q16560 246 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 PTPRNQ16849 979 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 HLA-BQ31612 363 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 WDR45BQ5MNZ6 344 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 STXBP4Q6ZWJ1 553 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 ADGRG2Q8IZP9 1017 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 ZNF513Q8N8E2 541 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 KIAA1958Q8N8K9 716 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 CGRRF1Q99675 332 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TRIM9Q9C026 710 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TRIM4Q9C037 500 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 ZNF518BQ9C0D4 1074 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 DPEP3Q9H4B8 488 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 KIAA1586Q9HCI6 787 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 IGSF5Q9NSI5 407 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 EHD2Q9NZN4 543 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
SMARCE1-210ENST00000481231 MTMR6Q9Y217 621 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms