RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 A0A1W2PQH9 124 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 ZNF197O14709 1029 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 TBX18O95935 607 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
TRA2B-212ENST00000480461 SERPING1P05155 500 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 LAMP2P13473 410 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 SLC8A3P57103 927 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 DAOAP59103 153 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 ZXDBP98169 803 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 TRIM14Q14142 442 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-212ENST00000480461 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 MON1AQ86VX9 555 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 SCML4Q8N228 414 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 LEMD2Q8NC56 503 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 TMEM35BQ8NCS4 154 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 RSPRY1Q96DX4 576 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 LRRC3BQ96PB8 259 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
TRA2B-212ENST00000480461 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
TRA2B-212ENST00000480461 FBXO44Q9H4M3 255 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 LRRC4Q9HBW1 653 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 ST7Q9NRC1 585 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 NUDT5Q9UKK9 219 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
TRA2B-212ENST00000480461 A0A087X0T9 212 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 FAM228BP0C875 321 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 MMP8P22894 467 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 GABRB2P47870 512 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 GSE1Q14687 1217 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 FAM78AQ5JUQ0 283 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 PHLDB2Q86SQ0 1253 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 MAB21L3Q8N8X9 362 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 SMG9Q9H0W8 520 aaKnown RBP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 SEMA4AQ9H3S1 761 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 TASP1Q9H6P5 420 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 CCSER2Q9H7U1 834 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 CYLDQ9NQC7 956 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 CNGB3Q9NQW8 809 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 UXTQ9UBK9 157 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-212ENST00000480461 NENFQ9UMX5 172 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 NCANO14594 1321 aa12.84□□□□□ -0.35
TRA2B-212ENST00000480461 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
TRA2B-212ENST00000480461 COCHO43405 550 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 FGF19O95750 216 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 ABL1P00519 1130 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 OAS1P00973 400 aaKnown RBP12.83□□□□□ -0.36
TRA2B-212ENST00000480461 FCARP24071 287 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 CDC25CP30307 473 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 VIPR2P41587 438 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 ACADSBP45954 432 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 CENPCQ03188 943 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 TANGO2Q6ICL3 276 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 PARM1Q6UWI2 310 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 ERICH1Q86X53 443 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 XYLT1Q86Y38 959 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 PHF13Q86YI8 300 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-212ENST00000480461 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 WBP2Q969T9 261 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRA2B-212ENST00000480461 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 EHD2Q9NZN4 543 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 EPS15L1Q9UBC2 864 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 DUSP12Q9UNI6 340 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 CCL26Q9Y258 94 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 BZW2Q9Y6E2 419 aaKnown RBP12.83□□□□□ -0.36
TRA2B-212ENST00000480461 R4GN57 208 aa12.83□□□□□ -0.36
TRA2B-212ENST00000480461 ACACBO00763 2458 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 TCRBV5S1A1TA0A578 114 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 MDM4O15151 490 aa12.82□□□□□ -0.36
TRA2B-212ENST00000480461 GJB6O95452 261 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms