RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 OTUD1Q5VV17 481 aaPredicted RBP17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 ELMSAN1Q6PJG2 1045 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 SPATA31D4Q6ZUB0 917 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 STRADAQ7RTN6 431 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 NT5DC3Q86UY8 548 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 TMC8Q8IU68 726 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 DEFB106AQ8N104 65 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 CMASQ8NFW8 434 aaPredicted RBP17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 FBXO32Q969P5 355 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 FAM149B1Q96BN6 582 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 BTBD6Q96KE9 485 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 SLITRK1Q96PX8 696 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 WDR24Q96S15 920 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 TLR8Q9NR97 1041 aaKnown RBP17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 JRKLQ9Y4A0 524 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 MYO16Q9Y6X6 1858 aa17.62■□□□□ 0.41
SCAMP3-207ENST00000480219 GRAP2O75791 330 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 LRG1P02750 347 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 SDC4P31431 198 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 PCK1P35558 622 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 PGFP49763 221 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 TUBP50607 506 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 NAP1L1P55209 391 aaKnown RBP17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 MESDQ14696 234 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 PPM1LQ5SGD2 360 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 MEI1Q5TIA1 1274 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 DAAM2Q86T65 1068 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 ARFGAP1Q8N6T3 406 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 STKLD1Q8NE28 680 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 GOLGA1Q92805 767 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 HES6Q96HZ4 224 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 C16orf45Q96MC5 204 aaPredicted RBP17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 ADAM33Q9BZ11 813 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 IL21Q9HBE4 155 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 DZANK1Q9NVP4 752 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 OSER1Q9NX31 292 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 GMIPQ9P107 970 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 STAP1Q9ULZ2 295 aa17.61■□□□□ 0.41
SCAMP3-207ENST00000480219 A0A1W2PQH9 124 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 PER2O15055 1255 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 LRCH4O75427 683 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 TADA3O75528 432 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 F11P03951 625 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 COMTP21964 271 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 PSMA2P25787 234 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 NRIP1P48552 1158 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 RNASE9P60153 205 aaKnown RBP17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 COL19A1Q14993 1142 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 LRRC38Q5VT99 294 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 SYPL2Q5VXT5 272 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 TMEM150AQ86TG1 271 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 VN1R2Q8NFZ6 395 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 SMOC2Q9H3U7 446 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 NAALADL1Q9UQQ1 740 aa17.6■□□□□ 0.41
SCAMP3-207ENST00000480219 CDH23Q9H251 3354 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 ZNF840PA6NDX5 716 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 CSPG5O95196 566 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 CTNNA2P26232 953 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 HYAL1Q12794 435 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 NNTQ13423 1086 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 DCAF6Q58WW2 860 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 BTBD8Q5XKL5 378 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 GPR153Q6NV75 609 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 POLNQ7Z5Q5 900 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 EFHBQ8N7U6 833 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 LEMD2Q8NC56 503 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 CASP10Q92851 521 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 ZNF707Q96C28 371 aaPredicted RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 ZNF512Q96ME7 567 aaPredicted RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 CFAP57Q96MR6 1250 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 TLR10Q9BXR5 811 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 PRKD2Q9BZL6 878 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 ZNF334Q9HCZ1 680 aaPredicted RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 OLA1Q9NTK5 396 aaKnown RBP17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 AMFRQ9UKV5 643 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 TRIOBPQ9H2D6 2365 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 MYO7AQ13402 2215 aa17.59■□□□□ 0.41
SCAMP3-207ENST00000480219 SOBPA7XYQ1 873 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 SOX1O00570 391 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 RFPL2O75678 378 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 FGF19O95750 216 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 NCAM1P13591 858 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 TNNT1P13805 278 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 PRLRP16471 622 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 PFKLP17858 780 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 CTNNA1P35221 906 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 HDAC4P56524 1084 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 IFRD2Q12894 506 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 GRIN2CQ14957 1233 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 C15orf59Q2T9L4 293 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 PABPC1LQ4VXU2 614 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms