RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 KBTBD7Q8WVZ9 684 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 PAGE5Q96GU1 130 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 C8orf48Q96LL4 319 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CEP295NLQ96MC4 621 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 PNKPQ96T60 521 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TSG101Q99816 390 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 GTPBP2Q9BX10 602 aaKnown RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 ZNF518BQ9C0D4 1074 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 RNF38Q9H0F5 515 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 DPEP3Q9H4B8 488 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 SMYD3Q9H7B4 428 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CAPN10Q9HC96 672 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 ZDHHC4Q9NPG8 344 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 FAM49BQ9NUQ9 324 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TBC1D14Q9P2M4 693 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 SLC6A14Q9UN76 642 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 ANKRD11Q6UB99 2663 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TCRBV21S2A2A0A5A6 115 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ZNF840PA6NDX5 716 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 TGFB1I1O43294 461 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 STX10O60499 249 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 OPHN1O60890 802 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 KAT7O95251 611 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 OLFM2O95897 454 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 MYL1P05976 194 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 SERPINF2P08697 491 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ADH5P11766 374 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 PFKLP17858 780 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 NR2F2P24468 414 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 RDXP35241 583 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 EIF2DP41214 584 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 SLC5A3P53794 718 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ATXN3P54252 364 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 CDH8P55286 799 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 MAP3K7CLP57077 242 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 USP46P62068 366 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 NOP14P78316 857 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 SLC7A9P82251 487 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ARID5AQ03989 594 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 GFPT1Q06210 699 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 SCAPQ12770 1279 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ORC1Q13415 861 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 BYSLQ13895 437 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 EOGTQ5NDL2 527 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 INTS8Q75QN2 995 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 EPM2AIP1Q7L775 607 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 FAM35AQ86V20 835 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 FAM186BQ8IYM0 893 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 PHTF2Q8N3S3 785 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 HDDC3Q8N4P3 179 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 MINDY1Q8N5J2 469 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 DEFB119Q8N690 84 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 KIAA1958Q8N8K9 716 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 OR2I1PQ8NGU4 316 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 CEP76Q8TAP6 659 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 SLC2A14Q8TDB8 520 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 HMGB4Q8WW32 186 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 CAMK1GQ96NX5 476 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 FBXO44Q9H4M3 255 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ARHGEF4Q9NR80 690 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 TLR8Q9NR97 1041 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 CHORDC1Q9UHD1 332 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-205ENST00000480127 HCN2Q9UL51 889 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 MAPK8IP1Q9UQF2 711 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ITPR1Q14643 2758 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 PCDH15Q96QU1 1955 aa7.49□□□□□ -1.21
COL17A1-205ENST00000480127 ADAMTS20P59510 1910 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 ANAPC1Q9H1A4 1944 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 LRRIQ3A6PVS8 624 aaPredicted RBP7.48□□□□□ -1.21
COL17A1-205ENST00000480127 PDXKO00764 312 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 AP5Z1O43299 807 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 SH3BP5O60239 455 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 GJB3O75712 270 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 SMC2O95347 1197 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 OAS1P00973 400 aaKnown RBP7.48□□□□□ -1.21
COL17A1-205ENST00000480127 HLA-DRAP01903 254 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 EPB41P11171 864 aaKnown RBP7.48□□□□□ -1.21
COL17A1-205ENST00000480127 RALAP11233 206 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 CCDC130P13994 396 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 GABRG2P18507 467 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 CMA1P23946 247 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 HOXD13P35453 343 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 PSMC2P35998 433 aaKnown RBP7.48□□□□□ -1.21
COL17A1-205ENST00000480127 GRIA2P42262 883 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 TNFRSF4P43489 277 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 GCLMP48507 274 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 VAMP7P51809 220 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 NDST1P52848 882 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 RPL6Q02878 288 aaKnown RBP7.48□□□□□ -1.21
COL17A1-205ENST00000480127 ZNF33AQ06730 810 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 STK4Q13043 487 aa7.48□□□□□ -1.21
COL17A1-205ENST00000480127 ADAM9Q13443 819 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms