RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 STKLD1Q8NE28 680 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 ZNF333Q96JL9 665 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 ACTL7BQ9Y614 415 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 A0A1B0GVG6 124 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 CPA3P15088 417 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 PEX2P28328 305 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 RAB27AP51159 221 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 EMC2Q15006 297 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 RALGPS1Q5JS13 557 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 VWA5B1Q5TIE3 1220 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 C16orf89Q6UX73 402 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 ETNK2Q9NVF9 386 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 NDUFA13Q9P0J0 144 aa13.97□□□□□ -0.17
USP42-206ENST00000479544 TCRBV9S1A1TA0A576 114 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 GSTA4O15217 222 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 ETFBP38117 255 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 SERPINB9P50453 376 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 CHN2P52757 468 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 FOLH1Q04609 750 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 NEDD8Q15843 81 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 NSUN6Q8TEA1 469 aaKnown RBP13.96□□□□□ -0.17
USP42-206ENST00000479544 MMP19Q99542 508 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 ILKAPQ9H0C8 392 aaPredicted RBP13.96□□□□□ -0.17
USP42-206ENST00000479544 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 BAG5Q9UL15 447 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 SPAG6O75602 509 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 RBL1P28749 1068 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 ABL2P42684 1182 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 ALDH1A3P47895 512 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 TAP1Q03518 808 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 PRAMEF18Q5VWM3 479 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 MOXD1Q6UVY6 613 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 GPR141Q7Z602 305 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 GABPB2Q8TAK5 448 aaPredicted RBP13.96□□□□□ -0.17
USP42-206ENST00000479544 HSD17B14Q9BPX1 270 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
USP42-206ENST00000479544 TMEM39BQ9GZU3 492 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 MYH2Q9UKX2 1941 aa13.96□□□□□ -0.17
USP42-206ENST00000479544 C1orf232A0A0U1RR37 186 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 STRNO43815 780 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 NPTXRO95502 500 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 IL10P22301 178 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 GAD2Q05329 585 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 DPYSL3Q14195 570 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 PTK2BQ14289 1009 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 CDHR1Q96JP9 859 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 SLITRK1Q96PX8 696 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 ADAM7Q9H2U9 754 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 TCF7L2Q9NQB0 619 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 FRMPD4Q14CM0 1322 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 GON4LQ3T8J9 2241 aa13.96□□□□□ -0.18
USP42-206ENST00000479544 M0R2N6 131 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
USP42-206ENST00000479544 ATP6V1G1O75348 118 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 TUBP50607 506 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 DCTN2Q13561 401 aaKnown RBP13.95□□□□□ -0.18
USP42-206ENST00000479544 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 B3GNT6Q6ZMB0 384 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 NCLNQ969V3 563 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 THAP1Q9NVV9 213 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 PRKAG3Q9UGI9 489 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 TDRKHQ9Y2W6 561 aaKnown RBP13.95□□□□□ -0.18
USP42-206ENST00000479544 SH3BP5O60239 455 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP42-206ENST00000479544 TRIM16LQ309B1 348 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 CDC26Q8NHZ8 85 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 PIWIL2Q8TC59 973 aaKnown RBP13.95□□□□□ -0.18
USP42-206ENST00000479544 RXFP2Q8WXD0 754 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 VPS39Q96JC1 886 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 TMEM109Q9BVC6 243 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 PREBQ9HCU5 417 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 PNPOQ9NVS9 261 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 WDR27A2RRH5 827 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 ALOX15BO15296 676 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 WFS1O76024 890 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 PRKCBP05771 671 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 MIPP30301 263 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 TGFB2P61812 414 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 AMIGO2Q86SJ2 522 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 DDX28Q9NUL7 540 aaKnown RBP13.95□□□□□ -0.18
USP42-206ENST00000479544 RNF19AQ9NV58 838 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 CDYLQ9Y232 598 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 C15orf38-AP3S2A0A0A6YYH1 394 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 THRAP10827 490 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 ALADP13716 330 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 TPH1P17752 444 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 RGS2P41220 211 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 GRIK3Q13003 919 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 NFIL3Q16649 462 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 CNPY1Q3B7I2 92 aa13.95□□□□□ -0.18
USP42-206ENST00000479544 FUT11Q495W5 492 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms