RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 GSTA3Q16772 222 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 PTPN20Q4JDL3 420 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 C1orf146Q5VVC0 180 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 LBX2Q6XYB7 198 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 NR1H4Q96RI1 486 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 TRIM56Q9BRZ2 755 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 SLC13A1Q9BZW2 595 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 TMEM134Q9H6X4 195 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 NDE1Q9NXR1 346 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 HMGXB4Q9UGU5 601 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ANGPTL2Q9UKU9 493 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 TRIM49D1C9J1S8 452 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 F8W8V4 182 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 PIK3R2O00459 728 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 BUD23O43709 281 aaKnown RBP13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 UGT1A9O60656 530 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 STAM2O75886 525 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 INHBAP08476 426 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 HOXC6P09630 235 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 BMPR2Q13873 1038 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 NET1Q7Z628 596 aaPredicted RBP13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 SMC1BQ8NDV3 1235 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 PYDC1Q8WXC3 89 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 NLRP4Q96MN2 994 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 FAM210AQ96ND0 272 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 UGT1A7Q9HAW7 530 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 UGT1A10Q9HAW8 530 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 UGT1A8Q9HAW9 530 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 IKBKGQ9Y6K9 419 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 LCTP09848 1927 aa13.83□□□□□ -0.19
PDZRN3-208ENST00000479530 COPEO14579 308 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 TOM1L1O75674 476 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 PRKCBP05771 671 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CD19P15391 556 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CRABP2P29373 138 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 PTPN7P35236 360 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 GRIA2P42262 883 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 ASPAP45381 313 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 SLC25A11Q02978 314 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 ARHGAP24Q8N264 748 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 FAM192AQ9GZU8 254 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 SDCBP2Q9H190 292 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 NRBP2Q9NSY0 501 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 PCSK1NQ9UHG2 260 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 SOCS7O14512 581 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 LRCH4O75427 683 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 C1QAP02745 245 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 PDE1BQ01064 536 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 LIN52Q52LA3 116 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CFAP157Q5JU67 520 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 FAM91A1Q658Y4 838 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 NPNTQ6UXI9 565 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 MOB2Q70IA6 237 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CTAGE3PQ8IX95 158 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 PPM1NQ8N819 430 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 USP6NLQ92738 828 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 MTBPQ96DY7 904 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CFAP36Q96G28 342 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CCDC106Q9BWC9 280 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 IRAK4Q9NWZ3 460 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 KCNK4Q9NYG8 393 aa13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 CPSF3Q9UKF6 684 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-208ENST00000479530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 KRT19P08727 400 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 CLCN3P51790 818 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 SLC25A3Q00325 362 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 DPYSL3Q14195 570 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 DUOXA2Q1HG44 320 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 TRMT5Q32P41 509 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 LPCAT4Q643R3 524 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 WDR49Q8IV35 697 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 DRAXINQ8NBI3 349 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 LRRN4Q8WUT4 740 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 SEPT1Q8WYJ6 367 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 NDNQ99608 321 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 MRPL4Q9BYD3 311 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 NIF3L1Q9GZT8 377 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 CEP350Q5VT06 3117 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 CXCL8P10145 99 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 PSMA2P25787 234 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 CDK7P50613 346 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 AP2B1P63010 937 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 TRPC3Q13507 836 aa13.82□□□□□ -0.2
PDZRN3-208ENST00000479530 PDCD2Q16342 344 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms