RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
TRIM59-205ENST00000479460 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
TRIM59-205ENST00000479460 A0A1B0GTW7 788 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 FAM92AA1XBS5 289 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 A8MXQ7 604 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 GFRA2O00451 464 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 IRF1P10914 325 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 TXLNAP40222 546 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 LARP1BQ659C4 914 aaKnown RBP20.49■□□□□ 0.87
TRIM59-205ENST00000479460 HTR3DQ70Z44 454 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 SCAMP5Q8TAC9 235 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 HNRNPLLQ8WVV9 542 aaKnown RBP20.49■□□□□ 0.87
TRIM59-205ENST00000479460 DNASE2BQ8WZ79 361 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 KCNK16Q96T55 309 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 SLC6A17Q9H1V8 727 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 COMMD8Q9NX08 183 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 HSPBP1Q9NZL4 362 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 MARK1Q9P0L2 795 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 DKK4Q9UBT3 224 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 FBXO2Q9UK22 296 aaPredicted RBP20.49■□□□□ 0.87
TRIM59-205ENST00000479460 RAXQ9Y2V3 346 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 RAD54BQ9Y620 910 aa20.49■□□□□ 0.87
TRIM59-205ENST00000479460 URB1O60287 2271 aaKnown RBP20.48■□□□□ 0.87
TRIM59-205ENST00000479460 HELZ2Q9BYK8 2649 aaKnown RBP20.48■□□□□ 0.87
TRIM59-205ENST00000479460 PRRT4C9JH25 899 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 NEDD8-MDP1E9PL57 170 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
TRIM59-205ENST00000479460 ZNF883P0CG24 379 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 TYRP14679 529 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 MAOBP27338 520 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 CD6P30203 668 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 SLC5A3P53794 718 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 RABEP1Q15276 862 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 STXBP4Q6ZWJ1 553 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 METTL3Q86U44 580 aaKnown RBP20.48■□□□□ 0.87
TRIM59-205ENST00000479460 ERLEC1Q96DZ1 483 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 BBS2Q9BXC9 721 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 NACA2Q9H009 215 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 GMIPQ9P107 970 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 WDR35Q9P2L0 1181 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 SMC3Q9UQE7 1217 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 SRPRBQ9Y5M8 271 aaKnown RBP20.48■□□□□ 0.87
TRIM59-205ENST00000479460 MYH10P35580 1976 aa20.48■□□□□ 0.87
TRIM59-205ENST00000479460 MEI4A8MW99 385 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 GREM1O60565 184 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 DLATP10515 647 aaKnown RBP20.47■□□□□ 0.87
TRIM59-205ENST00000479460 TNNI1P19237 187 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 KIAA1324Q6UXG2 1013 aaKnown RBP20.47■□□□□ 0.87
TRIM59-205ENST00000479460 CCDC73Q6ZRK6 1079 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 TMPRSS7Q7RTY8 843 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 FAM35AQ86V20 835 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 BBC3Q96PG8 261 aaPredicted RBP20.47■□□□□ 0.87
TRIM59-205ENST00000479460 CGRRF1Q99675 332 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 DMAP1Q9NPF5 467 aaPredicted RBP20.47■□□□□ 0.87
TRIM59-205ENST00000479460 CACNA2D2Q9NY47 1150 aa20.47■□□□□ 0.87
TRIM59-205ENST00000479460 WSB2Q9NYS7 404 aaPredicted RBP20.47■□□□□ 0.87
TRIM59-205ENST00000479460 TLR5O60602 858 aa20.46■□□□□ 0.87
TRIM59-205ENST00000479460 SNRNP35Q16560 246 aaKnown RBP20.46■□□□□ 0.87
TRIM59-205ENST00000479460 PAQR9Q6ZVX9 377 aa20.46■□□□□ 0.87
TRIM59-205ENST00000479460 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
TRIM59-205ENST00000479460 BAHD1Q8TBE0 780 aaPredicted RBP20.46■□□□□ 0.87
TRIM59-205ENST00000479460 SETD7Q8WTS6 366 aaKnown RBP20.46■□□□□ 0.87
TRIM59-205ENST00000479460 SMARCD1Q96GM5 515 aa20.46■□□□□ 0.87
TRIM59-205ENST00000479460 CLIC4Q9Y696 253 aa20.46■□□□□ 0.87
TRIM59-205ENST00000479460 CER1O95813 267 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 CISD3P0C7P0 127 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 NCAM1P13591 858 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 STAT6P42226 847 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 DGKGP49619 791 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 PSMD6Q15008 389 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 TPGS1Q6ZTW0 290 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 ZCCHC9Q8N567 271 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 GLIS3Q8NEA6 775 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 CADM4Q8NFZ8 388 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 TOE1Q96GM8 510 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 LRIG1Q96JA1 1093 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 CLIC6Q96NY7 704 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 MED10Q9BTT4 135 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 KLF16Q9BXK1 252 aaPredicted RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
TRIM59-205ENST00000479460 USP36Q9P275 1121 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 NXF1Q9UBU9 619 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 LSM7Q9UK45 103 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 GOLGA4Q13439 2230 aaKnown RBP20.45■□□□□ 0.86
TRIM59-205ENST00000479460 EIF4E1BA6NMX2 242 aaKnown RBP20.44■□□□□ 0.86
TRIM59-205ENST00000479460 WASH3PC4AMC7 463 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 DKK1O94907 266 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 NEFLP07196 543 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 ATICP31939 592 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 HOXD13P35453 343 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 MYL6P60660 151 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 TRPC3Q13507 836 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 STARD3Q14849 445 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 IL27RAQ6UWB1 636 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 RDH13Q8NBN7 331 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
TRIM59-205ENST00000479460 GPR174Q9BXC1 333 aa20.44■□□□□ 0.86
TRIM59-205ENST00000479460 TRIM9Q9C026 710 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms