RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 SLCO6A1Q86UG4 719 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 CBWD2Q8IUF1 395 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 GALNT15Q8N3T1 639 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 ZCCHC9Q8N567 271 aaKnown RBP17.05■□□□□ 0.32
DDX56-210ENST00000479440 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 DNASE2BQ8WZ79 361 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 ERLEC1Q96DZ1 483 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 BBC3Q96PG8 261 aaPredicted RBP17.05■□□□□ 0.32
DDX56-210ENST00000479440 CDC6Q99741 560 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 SLC6A17Q9H1V8 727 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 KIAA1586Q9HCI6 787 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
DDX56-210ENST00000479440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■■ 195.6
DDX56-210ENST00000479440 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 CACNA2D2Q9NY47 1150 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 MARK1Q9P0L2 795 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 LSM7Q9UK45 103 aaKnown RBP17.05■□□□□ 0.32
DDX56-210ENST00000479440 NME7Q9Y5B8 376 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 LAMA5O15230 3695 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 FRMD3A2A2Y4 597 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 DGKGP49619 791 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 METTL3Q86U44 580 aaKnown RBP17.04■□□□□ 0.32
DDX56-210ENST00000479440 FAM35AQ86V20 835 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 CADM4Q8NFZ8 388 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 TOE1Q96GM8 510 aaKnown RBP17.04■□□□□ 0.32
DDX56-210ENST00000479440 EPSTI1Q96J88 318 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 MED10Q9BTT4 135 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 MIR1-1HGQ9H1L0 117 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 GAREM1Q9H706 876 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 TM7SF3Q9NS93 570 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 GMIPQ9P107 970 aa17.04■□□□□ 0.32
DDX56-210ENST00000479440 CHORDC1Q9UHD1 332 aaPredicted RBP17.04■□□□□ 0.32
DDX56-210ENST00000479440 NBEAQ8NFP9 2946 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 TLR5O60602 858 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 TNNI1P19237 187 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 ZNF132P52740 706 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 WDR72Q3MJ13 1102 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 TPGS1Q6ZTW0 290 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 HTR3DQ70Z44 454 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 SCUBE3Q8IX30 993 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
DDX56-210ENST00000479440 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 CGRRF1Q99675 332 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 FGFBP2Q9BYJ0 223 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 PRDM16Q9HAZ2 1276 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 PANK4Q9NVE7 773 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 WSB2Q9NYS7 404 aaPredicted RBP17.03■□□□□ 0.32
DDX56-210ENST00000479440 HSPBP1Q9NZL4 362 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 USP36Q9P275 1121 aaKnown RBP17.03■□□□□ 0.32
DDX56-210ENST00000479440 PCDHGB2Q9Y5G2 931 aa17.03■□□□□ 0.32
DDX56-210ENST00000479440 SMG1Q96Q15 3661 aaKnown RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 PRRT4C9JH25 899 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 NPC1O15118 1278 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 CILPO75339 1184 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 ZDHHC11BP0C7U3 371 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 OXTRP30559 389 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 TRPC3Q13507 836 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 DCAF12L1Q5VU92 463 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 CCDC73Q6ZRK6 1079 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 SCAMP5Q8TAC9 235 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 UBL7Q96S82 380 aaPredicted RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 KIF2CQ99661 725 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 GPR174Q9BXC1 333 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 IL21RQ9HBE5 538 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 TLR8Q9NR97 1041 aaKnown RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 TOR4AQ9NXH8 423 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 IL37Q9NZH6 218 aa17.02■□□□□ 0.32
DDX56-210ENST00000479440 FNDC3AQ9Y2H6 1198 aaKnown RBP17.02■□□□□ 0.32
DDX56-210ENST00000479440 LOC400499M0QZD8 3231 aa17.02■□□□□ 0.31
DDX56-210ENST00000479440 PLXNB3Q9ULL4 1909 aa17.02■□□□□ 0.31
DDX56-210ENST00000479440 A0A087WV48 116 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 FAM92AA1XBS5 289 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 BCAT2O15382 392 aaPredicted RBP17.01■□□□□ 0.31
DDX56-210ENST00000479440 DKK1O94907 266 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 CLSTN1O94985 981 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 ATICP31939 592 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 STAT6P42226 847 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 ABCG1P45844 678 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 SUZ12Q15022 739 aaKnown RBP17.01■□□□□ 0.31
DDX56-210ENST00000479440 E2F5Q15329 346 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 FUT11Q495W5 492 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 WBP2Q969T9 261 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
DDX56-210ENST00000479440 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 FBXO44Q9H4M3 255 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 KRT82Q9NSB4 513 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 NXF1Q9UBU9 619 aaKnown RBP17.01■□□□□ 0.31
DDX56-210ENST00000479440 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 STON1Q9Y6Q2 735 aa17.01■□□□□ 0.31
DDX56-210ENST00000479440 MYOFQ9NZM1 2061 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms