RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PIAS3Q9Y6X2 628 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 TRIOO75962 3097 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 A0A1W2PQC6 194 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 MAN2B1O00754 1011 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 EPHB6O15197 1021 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 GFPT2O94808 682 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 JAM2P57087 298 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 STARD6P59095 220 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 DAOAP59103 153 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 ITPRIPL2Q3MIP1 535 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 ZNF852Q6ZMS4 543 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 PASD1Q8IV76 773 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 RNF139Q8WU17 664 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 TRIM62Q9BVG3 475 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 ABCC13Q9NSE7 274 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 STRIP2Q9ULQ0 834 aa21.49■■□□□ 1.03
VARS-224ENST00000479051 E2F8A0AVK6 867 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 PIK3R2O00459 728 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 NFATC1O95644 943 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 TBX18O95935 607 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 PDGFBP01127 241 aaPredicted RBP21.48■■□□□ 1.03
VARS-224ENST00000479051 TPM3P06753 285 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 CCDC172P0C7W6 258 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 RPL34P49207 117 aaKnown RBP21.48■■□□□ 1.03
VARS-224ENST00000479051 CLCN5P51795 746 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 UBASH3AP57075 661 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 AMPD2Q01433 879 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 PDCLQ13371 301 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 RUNX3Q13761 415 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 ZNF677Q86XU0 584 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 CPA6Q8N4T0 437 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 TMEM35BQ8NCS4 154 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 RIN3Q8TB24 985 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 IPO4Q8TEX9 1081 aaKnown RBP21.48■■□□□ 1.03
VARS-224ENST00000479051 NAP1L5Q96NT1 182 aaPredicted RBP21.48■■□□□ 1.03
VARS-224ENST00000479051 SLC4A5Q9BY07 1137 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 MIS12Q9H081 205 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 EBF3Q9H4W6 596 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 TBC1D14Q9P2M4 693 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 RASAL2Q9UJF2 1139 aa21.48■■□□□ 1.03
VARS-224ENST00000479051 LSM7Q9UK45 103 aaKnown RBP21.48■■□□□ 1.03
VARS-224ENST00000479051 COG7P83436 770 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 ZXDBP98169 803 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 NR1H3Q13133 447 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 NR1I3Q14994 352 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 BSPRYQ5W0U4 402 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 ASTLQ6HA08 431 aaPredicted RBP21.47■■□□□ 1.03
VARS-224ENST00000479051 MSANTD4Q8NCY6 345 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 EPS8L1Q8TE68 723 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 NDRG1Q92597 394 aaKnown RBP21.47■■□□□ 1.03
VARS-224ENST00000479051 PPP1R13BQ96KQ4 1090 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 ZFRQ96KR1 1074 aaKnown RBP21.47■■□□□ 1.03
VARS-224ENST00000479051 NELL2Q99435 816 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 SYNCQ9H7C4 482 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 GTSE1Q9NYZ3 720 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 NUDT5Q9UKK9 219 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 WNT6Q9Y6F9 365 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 TICRRQ7Z2Z1 1910 aa21.47■■□□□ 1.03
VARS-224ENST00000479051 KIF26AQ9ULI4 1882 aaPredicted RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 KANSL1LA0AUZ9 987 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 YJEFN3A6XGL0 299 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 E5RJQ4 531 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 E7ENQ6 273 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 LTFP02788 710 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 IRF1P10914 325 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 ZNF445P59923 1031 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 TNK2Q07912 1038 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 EFEMP1Q12805 493 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 TAF3Q5VWG9 929 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 TRIM68Q6AZZ1 485 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 BHLHA9Q7RTU4 235 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 TMEM110Q86TL2 294 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 NOP9Q86U38 636 aaKnown RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 RALGPS2Q86X27 583 aaPredicted RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 MIB1Q86YT6 1006 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 C1orf131Q8NDD1 294 aaKnown RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 EXOC4Q96A65 974 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 FAM149B1Q96BN6 582 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 OTUB2Q96DC9 234 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 DDX23Q9BUQ8 820 aaKnown RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 KLF16Q9BXK1 252 aaPredicted RBP21.46■■□□□ 1.03
VARS-224ENST00000479051 MARCH2Q9P0N8 246 aa21.46■■□□□ 1.03
VARS-224ENST00000479051 MDM4O15151 490 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 NCAM2O15394 837 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 GABBR2O75899 941 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 LSM8O95777 96 aaKnown RBP21.45■■□□□ 1.02
VARS-224ENST00000479051 ARSAP15289 507 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 AOC1P19801 751 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 UBXN2BQ14CS0 331 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 EML3Q32P44 896 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 IER5LQ5T953 404 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 SCUBE3Q8IX30 993 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 TTC8Q8TAM2 541 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 FAM3CQ92520 227 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 HPS4Q9NQG7 708 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 CYTH4Q9UIA0 394 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 MYO6Q9UM54 1294 aa21.45■■□□□ 1.02
VARS-224ENST00000479051 SPECC1L-ADORA2AF8WAN1 911 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 CTHP32929 405 aa21.44■■□□□ 1.02
VARS-224ENST00000479051 CDR2Q01850 454 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms