RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 SMARCD1Q96GM5 515 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 ACOX2Q99424 681 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 GABRG3Q99928 467 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 UPF2Q9HAU5 1272 aaKnown RBP13.54□□□□□ -0.24
TDP2-204ENST00000478507 CSNK1G1Q9HCP0 422 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 DNAAF2Q9NVR5 837 aaKnown RBP13.54□□□□□ -0.24
TDP2-204ENST00000478507 COMMD8Q9NX08 183 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 SH3BP1Q9Y3L3 701 aa13.54□□□□□ -0.24
TDP2-204ENST00000478507 HOXB2P14652 356 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 NDUFV2P19404 249 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 CASP4P49662 377 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 ASIC1P78348 528 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 GFPT1Q06210 699 aaPredicted RBP13.53□□□□□ -0.24
TDP2-204ENST00000478507 TRPC3Q13507 836 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 PREPLQ4J6C6 727 aaPredicted RBP13.53□□□□□ -0.24
TDP2-204ENST00000478507 SHC4Q6S5L8 630 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 RABEPKQ7Z6M1 372 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 DEFB119Q8N690 84 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 SMOQ99835 787 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
TDP2-204ENST00000478507 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
TDP2-204ENST00000478507 CYLDQ9NQC7 956 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 KRT82Q9NSB4 513 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 OSER1Q9NX31 292 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
TDP2-204ENST00000478507 PRRT4C9JH25 899 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 TAF4O00268 1085 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 TLR5O60602 858 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 PPP6R2O75170 966 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 ZNF217O75362 1048 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 VNN1O95497 513 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 C4BPAP04003 597 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 WASP42768 502 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 AMPD3Q01432 767 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 COL9A2Q14055 689 aaPredicted RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 ANO4Q32M45 955 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 ZNF699Q32M78 642 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 UNC13DQ70J99 1090 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 RAB44Q7Z6P3 723 aaPredicted RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 PARD3BQ8TEW8 1205 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 IPO4Q8TEX9 1081 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 ELMO3Q96BJ8 720 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 DHX58Q96C10 678 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 ZNF419Q96HQ0 510 aaPredicted RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 GTPBP2Q9BX10 602 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 CD93Q9NPY3 652 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 CGNQ9P2M7 1197 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
TDP2-204ENST00000478507 SMG1Q96Q15 3661 aaKnown RBP13.52□□□□□ -0.25
TDP2-204ENST00000478507 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 LRRIQ3A6PVS8 624 aaPredicted RBP13.51□□□□□ -0.25
TDP2-204ENST00000478507 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 H0Y626 953 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 SPTLC2O15270 562 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 OPHN1O60890 802 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 AP1G2O75843 785 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 TRIM16O95361 564 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 TBX18O95935 607 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 CISD3P0C7P0 127 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 IRF1P10914 325 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 CCDC130P13994 396 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 TYRP14679 529 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 CASP1P29466 404 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 RING1Q06587 406 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 NCOA4Q13772 614 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 KNOP1Q1ED39 458 aaKnown RBP13.51□□□□□ -0.25
TDP2-204ENST00000478507 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 Q6ZNB5 142 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 TOGARAM2Q6ZUX3 1019 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 GPRIN1Q7Z2K8 1008 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 ACOT1Q86TX2 421 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 HDDC3Q8N4P3 179 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 IQUBQ8NA54 791 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 MRGPRX1Q96LB2 322 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 HSPA12BQ96MM6 686 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 MED10Q9BTT4 135 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 FBXO10Q9UK96 956 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 ACACAQ13085 2346 aa13.51□□□□□ -0.25
TDP2-204ENST00000478507 APC2O95996 2303 aa13.5□□□□□ -0.25
TDP2-204ENST00000478507 KNL1Q8NG31 2342 aa13.5□□□□□ -0.25
TDP2-204ENST00000478507 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
TDP2-204ENST00000478507 STX6O43752 255 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms