RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DTX3LQ8TDB6 740 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 MRPS31Q92665 395 aaKnown RBP14.69□□□□□ -0.06
NPHP4-208ENST00000478423 CDY2AQ9Y6F7 541 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 CDY1Q9Y6F8 540 aa14.69□□□□□ -0.06
NPHP4-208ENST00000478423 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 RIPK2O43353 540 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SSTR1P30872 391 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ELK3P41970 407 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SERPINB4P48594 390 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 MARCKSL1P49006 195 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 MAMLD1Q13495 774 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 RBM22Q9NW64 420 aaKnown RBP eCLIP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 KANSL3Q9P2N6 904 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SLC15A5A6NIM6 579 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 PQBP1O60828 265 aaKnown RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ENDOD1O94919 500 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 FAM83EQ2M2I3 478 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ATP13A4Q4VNC1 1196 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 TMCO4Q5TGY1 634 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ZSWIM2Q8NEG5 633 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 DMAP1Q9NPF5 467 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 AAASQ9NRG9 546 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 STK25O00506 426 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ADAMTS3O15072 1205 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 CLK2P49760 499 aaKnown RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 INHBEP58166 350 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 AGGF1Q8N302 714 aaeCLIP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 RNF217Q8TC41 542 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SMARCD1Q96GM5 515 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 THTPAQ9BU02 230 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SAE1Q9UBE0 346 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SLC24A2Q9UI40 661 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 PHTF1Q9UMS5 762 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 NID2Q14112 1375 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SYF2O95926 243 aaKnown RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 URODP06132 367 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 DNAJB2P25686 324 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 RGS4P49798 205 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SCNN1GP51170 649 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SH3BGRP55822 239 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 ACAP1Q15027 740 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 TBCCQ15814 346 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 MFN1Q8IWA4 741 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 C12orf56Q8IXR9 622 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 KATNAL2Q8IYT4 538 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 XRN1Q8IZH2 1706 aaKnown RBP14.68□□□□□ -0.06
NPHP4-208ENST00000478423 PLIN4Q96Q06 1357 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 CHST12Q9NRB3 414 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 SLC13A4Q9UKG4 626 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 PKP3Q9Y446 797 aa14.68□□□□□ -0.06
NPHP4-208ENST00000478423 AFDNP55196 1824 aaKnown RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 NALCNQ8IZF0 1738 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 ANGPT2O15123 496 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 NCAM2O15394 837 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 RHOBTB1O94844 696 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 ASS1P00966 412 aaKnown RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 BMPR2Q13873 1038 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TMEM259Q4ZIN3 620 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TIGD7Q6NT04 549 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 MRNIPQ6NTE8 343 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 KCNT2Q6UVM3 1135 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 ULBP1Q9BZM6 244 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 CASS4Q9NQ75 786 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 AIM2O14862 343 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TIMM44O43615 452 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 APOC2P02655 101 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 SMIM10L2AP0DMW4 78 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 SMIM10L2BP0DMW5 78 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 MBL2P11226 248 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 BDNFP23560 247 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 CPA2P48052 419 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 WSCD1Q658N2 575 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 LRRC8EQ6NSJ5 796 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TFAP2DQ7Z6R9 452 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TMEM139Q8IV31 216 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 KIRREL3Q8IZU9 778 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TRIML2Q8N7C3 387 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 C10orf88Q9H8K7 445 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TCHHQ07283 1943 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 A0A0B4J269 797 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 GLRA3O75311 464 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TMCC1O94876 653 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 PDHA1P08559 390 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 MLH1P40692 756 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TSEN2Q8NCE0 465 aaKnown RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 MTMR14Q8NCE2 650 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 TMA16Q96EY4 203 aaKnown RBP14.67□□□□□ -0.06
NPHP4-208ENST00000478423 NT5MQ9NPB1 228 aa14.67□□□□□ -0.06
NPHP4-208ENST00000478423 PIH1D1Q9NWS0 290 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms