RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 TBC1D3BA6NDS4 549 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 HLA-DRAP01903 254 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 IRF1P10914 325 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 P4HA1P13674 534 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 PFKFB1P16118 471 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 PTGER3P43115 390 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 CLEC20AQ6ZU45 233 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 MIB1Q86YT6 1006 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 TMEFF1Q8IYR6 380 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 KCNV2Q8TDN2 545 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 PIGKQ92643 395 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 HNRNPABQ99729 332 aaKnown RBP17.66■□□□□ 0.42
TRIM13-208ENST00000478111 FBXO44Q9H4M3 255 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 APOBEC3GQ9HC16 384 aaKnown RBP17.66■□□□□ 0.42
TRIM13-208ENST00000478111 CYLDQ9NQC7 956 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 FAM49BQ9NUQ9 324 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 TMEM74BQ9NUR3 256 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 DEC1Q9P2X7 70 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 TRAF3IP3Q9Y228 551 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 STARD13Q9Y3M8 1113 aa17.66■□□□□ 0.42
TRIM13-208ENST00000478111 TCRBV21S2A2A0A5A6 115 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 CLSTN1O94985 981 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 CMA1P23946 247 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 INCA1Q0VD86 236 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 ANO4Q32M45 955 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 DAB2IPQ5VWQ8 1189 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 ZNF513Q8N8E2 541 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-208ENST00000478111 TERB1Q8NA31 727 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 HMGB4Q8WW32 186 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 NMUR1Q9HB89 426 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 CD248Q9HCU0 757 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 TMEM9BQ9NQ34 198 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
TRIM13-208ENST00000478111 EVLQ9UI08 416 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-208ENST00000478111 SCML2Q9UQR0 700 aa17.65■□□□□ 0.42
TRIM13-208ENST00000478111 SPEGQ15772 3267 aa17.64■□□□□ 0.42
TRIM13-208ENST00000478111 MAPK13O15264 365 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 GABRG2P18507 467 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 ADORA2BP29275 332 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 NOVA1P51513 510 aaKnown RBP17.64■□□□□ 0.41
TRIM13-208ENST00000478111 SPDYCQ5MJ68 293 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 C10orf76Q5T2E6 689 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 LPCAT2Q7L5N7 544 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 CYFIP2Q96F07 1278 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 P2RY11Q96G91 374 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■■■■■ 67.3
TRIM13-208ENST00000478111 MARK1Q9P0L2 795 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 BCCIPQ9P287 314 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRIM13-208ENST00000478111 WASF3Q9UPY6 502 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 DMXL2Q8TDJ6 3036 aa17.64■□□□□ 0.41
TRIM13-208ENST00000478111 A0A1W2PQF6 199 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 CYP26A1O43174 497 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 MAP3K13O43283 966 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 MYL1P05976 194 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 FAM200BP0CF97 657 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 CSRP1P21291 193 aaKnown RBP17.63■□□□□ 0.41
TRIM13-208ENST00000478111 ATP5C1P36542 298 aaKnown RBP17.63■□□□□ 0.41
TRIM13-208ENST00000478111 PIK3CAP42336 1068 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 VAMP7P51809 220 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-208ENST00000478111 PPP3CAQ08209 521 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 NFIL3Q16649 462 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 SH3PXD2AQ5TCZ1 1133 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 PEAR1Q5VY43 1037 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-208ENST00000478111 ARMCX6Q7L4S7 300 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 SYT12Q8IV01 421 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 TAS1R2Q8TE23 839 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 SPACA7Q96KW9 195 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 ACOX2Q99424 681 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 NACA2Q9H009 215 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-208ENST00000478111 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
TRIM13-208ENST00000478111 PCDH15Q96QU1 1955 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 FAM237AA0A1B0GTK4 181 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PRRT4C9JH25 899 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 MDM4O15151 490 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 CALUO43852 315 aaPredicted RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 CACNG3O60359 315 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 RHOBTB3O94955 611 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TRIM49P0CI25 452 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TRIM49CP0CI26 452 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TYRP14679 529 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 ACO1P21399 889 aaKnown RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 NTSR1P30989 418 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 WASP42768 502 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 GCLMP48507 274 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 BYSLQ13895 437 aaKnown RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PREPLQ4J6C6 727 aaPredicted RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TRIM61Q5EBN2 209 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 EGFLAMQ63HQ2 1017 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 GRAMD4Q6IC98 578 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms