RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ZSCAN22P10073 491 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-211ENST00000477890 HOXB2P14652 356 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 ENGP17813 658 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 GABRG2P18507 467 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 SPINK2P20155 84 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 ITPKAP23677 461 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 ADORA2BP29275 332 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 WASP42768 502 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 ZACNQ401N2 412 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 UNQ6494/PRO21346Q6UXR6 183 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 UNC93AQ86WB7 457 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 CRYBG2Q8N1P7 616 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 DEFB119Q8N690 84 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 C12orf29Q8N999 325 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 DEFB124Q8NES8 71 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 JAKMIP2Q96AA8 810 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 CSNK1G1Q9HCP0 422 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
CPSF7-211ENST00000477890 DMAC2Q9NW81 257 aa12.42□□□□□ -0.42
CPSF7-211ENST00000477890 TOP3BO95985 862 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 NR3C1P04150 777 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 RPN1P04843 607 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 CFIP05156 583 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 SLFN14P0C7P3 912 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 TRIM21P19474 475 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 NTSR1P30989 418 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 ATP5C1P36542 298 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 PIK3CAP42336 1068 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 DPP6P42658 865 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 RPL6Q02878 288 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 SLC23A3Q6PIS1 610 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 TPGS1Q6ZTW0 290 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 SV2AQ7L0J3 742 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 GPRIN1Q7Z2K8 1008 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 TAF4BQ92750 862 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 ERLEC1Q96DZ1 483 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 PAGE5Q96GU1 130 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 KCTD10Q9H3F6 313 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
CPSF7-211ENST00000477890 PILRBQ9UKJ0 227 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 HCN2Q9UL51 889 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 CEP295Q9C0D2 2601 aa12.41□□□□□ -0.42
CPSF7-211ENST00000477890 PDXKO00764 312 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CYP26A1O43174 497 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ACTN4O43707 911 aaKnown RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CACNG3O60359 315 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 GREM1O60565 184 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ASS1P00966 412 aaKnown RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 TYRP14679 529 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ASPAP45381 313 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 DUOXA1Q1HG43 343 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 SDE2Q6IQ49 451 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 SLC36A4Q6YBV0 504 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CHPFQ8IZ52 775 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 TWNKQ96RR1 684 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ACOX2Q99424 681 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 GTPBP2Q9BX10 602 aaKnown RBP12.4□□□□□ -0.42
CPSF7-211ENST00000477890 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 SLC32A1Q9H598 525 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CYLDQ9NQC7 956 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 OSER1Q9NX31 292 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 NUDT5Q9UKK9 219 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 SCML2Q9UQR0 700 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 STARD13Q9Y3M8 1113 aa12.4□□□□□ -0.42
CPSF7-211ENST00000477890 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 A0A1W2PQF6 199 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 A0A1W2PQH9 124 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 PCNX2A6NKB5 2137 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 PRRT4C9JH25 899 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms