RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PTPN1P18031 435 aaKnown RBP21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 DUOXA2Q1HG44 320 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 KIAA1324Q6UXG2 1013 aaKnown RBP21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 METTL3Q86U44 580 aaKnown RBP21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 SCUBE3Q8IX30 993 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 SCFD1Q8WVM8 642 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 WBP2Q969T9 261 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 DPEP3Q9H4B8 488 aa21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 FNDC3AQ9Y2H6 1198 aaKnown RBP21.48■■□□□ 1.03
PDLIM1-202ENST00000477757 NEDD8-MDP1E9PL57 170 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 CLDN5O00501 218 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 KIAA0391O15091 583 aaKnown RBP21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 SURF1Q15526 300 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 WDR49Q8IV35 697 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 B3GALNT2Q8NCR0 500 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 OR6B3Q8NGW1 331 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 TOE1Q96GM8 510 aaKnown RBP21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 XPO6Q96QU8 1125 aaKnown RBP21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 CDC6Q99741 560 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 B3GNT5Q9BYG0 378 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 FGFBP2Q9BYJ0 223 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 GAREM1Q9H706 876 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 TM7SF3Q9NS93 570 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 MARK1Q9P0L2 795 aa21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 USP36Q9P275 1121 aaKnown RBP21.47■■□□□ 1.03
PDLIM1-202ENST00000477757 H3BQV1 296 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 FLRT2O43155 660 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 CILPO75339 1184 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 FAM163BP0C2L3 166 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 ATXN1LP0C7T5 689 aaKnown RBP21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 ZDHHC11BP0C7U3 371 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 IRF1P10914 325 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 NCAM1P13591 858 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 TYRP14679 529 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 MATKP42679 507 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 CYP4F3Q08477 520 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 IL27RAQ6UWB1 636 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 GALNT15Q8N3T1 639 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 CADM4Q8NFZ8 388 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 SCAMP5Q8TAC9 235 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 UBL7Q96S82 380 aaPredicted RBP21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 BBS2Q9BXC9 721 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 WSB2Q9NYS7 404 aaPredicted RBP21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 IL37Q9NZH6 218 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 PCDHGB2Q9Y5G2 931 aa21.46■■□□□ 1.03
PDLIM1-202ENST00000477757 TENM4Q6N022 2769 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 FAM92AA1XBS5 289 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 GREM1O60565 184 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 SLC5A3P53794 718 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 BNC1Q01954 994 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 CAMK2BQ13554 666 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 DBX2Q6ZNG2 339 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 HTR3DQ70Z44 454 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 TRAPPC11Q7Z392 1133 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 CBWD2Q8IUF1 395 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 CRELD1Q96HD1 420 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 EPSTI1Q96J88 318 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 KIF2CQ99661 725 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 NACA2Q9H009 215 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 GMIPQ9P107 970 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 WDR35Q9P2L0 1181 aa21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 CHORDC1Q9UHD1 332 aaPredicted RBP21.45■■□□□ 1.02
PDLIM1-202ENST00000477757 FRMD3A2A2Y4 597 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 TRABD2BA6NFA1 517 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 ZNF233A6NK53 670 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 BCAT2O15382 392 aaPredicted RBP21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 PRPF6O94906 941 aaKnown RBP21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 STARD3Q14849 445 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 FUT11Q495W5 492 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 USP49Q70CQ1 688 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 KCNK16Q96T55 309 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 GPR174Q9BXC1 333 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 TRIM9Q9C026 710 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 MIR1-1HGQ9H1L0 117 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 PRDM16Q9HAZ2 1276 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 ATP8B3O60423 1300 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 ASXL3Q9C0F0 2248 aa21.44■■□□□ 1.02
PDLIM1-202ENST00000477757 TLR5O60602 858 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 DGKGP49619 791 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 TNNC1P63316 161 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 C19orf57Q0VDD7 668 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 HLA-BQ31612 363 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 FAM35AQ86V20 835 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 MARCH9Q86YJ5 346 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 MKRN2Q9H000 416 aaKnown RBP21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 DMAP1Q9NPF5 467 aaPredicted RBP21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 STON1Q9Y6Q2 735 aa21.43■■□□□ 1.02
PDLIM1-202ENST00000477757 A8MXQ7 604 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 KCNJ18B7U540 433 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 WASH3PC4AMC7 463 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 IDEP14735 1019 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 SF3A1Q15459 793 aaKnown RBP21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 WDR72Q3MJ13 1102 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 DCAF12L1Q5VU92 463 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 SV2BQ7L1I2 683 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 RHBDD1Q8TEB9 315 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 ITM2CQ9NQX7 267 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 COMMD8Q9NX08 183 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 CCDC39Q9UFE4 941 aa21.42■■□□□ 1.02
PDLIM1-202ENST00000477757 IGLV3-19P01714 112 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms