RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 GAD2Q05329 585 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 PLEKHG6Q3KR16 790 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 CCDC26Q8TAB7 109 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 BAHD1Q8TBE0 780 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-204ENST00000477429 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 MRGPRX1Q96LB2 322 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 AK8Q96MA6 479 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 ACCSQ96QU6 501 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
COL4A5-204ENST00000477429 SPHK2Q9NRA0 654 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 OSER1Q9NX31 292 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 GMIPQ9P107 970 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 FNDC3AQ9Y2H6 1198 aaKnown RBP10.38□□□□□ -0.75
COL4A5-204ENST00000477429 A0A1W2PQD8 194 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 E2F8A0AVK6 867 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 SLC9A3R1O14745 358 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 BEST1O76090 585 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 DKK1O94907 266 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 GCNT3O95395 438 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 TMEM191BP0C7N4 346 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 PFKLP17858 780 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 PTPN1P18031 435 aaKnown RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 ANXA13P27216 316 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 GJB2P29033 226 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 NTSR1P30989 418 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 CYP4F3Q08477 520 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 POSTNQ15063 836 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 ANO4Q32M45 955 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 SLC36A4Q6YBV0 504 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 DPH6Q7L8W6 267 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 ZCCHC9Q8N567 271 aaKnown RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 ZMIZ2Q8NF64 920 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 PLEKHO2Q8TD55 490 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 BHMTQ93088 406 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 HVCN1Q96D96 273 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 CLIC6Q96NY7 704 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 UBL7Q96S82 380 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-204ENST00000477429 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 GABRG3Q99928 467 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 SDCBP2Q9H190 292 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 DEC1Q9P2X7 70 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 STARD13Q9Y3M8 1113 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 CLIC4Q9Y696 253 aa10.37□□□□□ -0.75
COL4A5-204ENST00000477429 TK2O00142 265 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TRIM66O15016 1216 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 SLC26A4O43511 780 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 ZDHHC11BP0C7U3 371 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 GARTP22102 1010 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 LONP1P36776 959 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 GNL1P36915 607 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 MLLT3P42568 568 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 CDH8P55286 799 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 MYO1EQ12965 1108 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 SLC14A1Q13336 389 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 ORC1Q13415 861 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 FUT11Q495W5 492 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TDRD10Q5VZ19 366 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 LAYNQ6UX15 382 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 KIAA1324Q6UXG2 1013 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TPGS1Q6ZTW0 290 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TMPRSS7Q7RTY8 843 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TRAPPC11Q7Z392 1133 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 GLRX5Q86SX6 157 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 RGL4Q8IZJ4 473 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 KIAA1958Q8N8K9 716 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 FBXO32Q969P5 355 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 MKRN2Q9H000 416 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 SMYD3Q9H7B4 428 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 DNAJC17Q9NVM6 304 aaKnown RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 PLK2Q9NYY3 685 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 IL37Q9NZH6 218 aa10.36□□□□□ -0.75
COL4A5-204ENST00000477429 FBXO2Q9UK22 296 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-204ENST00000477429 FRMD3A2A2Y4 597 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 TRABD2BA6NFA1 517 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 GOLGA8CPA6NN73 597 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.35□□□□□ -0.75
COL4A5-204ENST00000477429 NEDD8-MDP1E9PL57 170 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 KCNK3O14649 394 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 MDM4O15151 490 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 CILPO75339 1184 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 SYPP08247 313 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 YWHAQP27348 245 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 ITPKBP27987 946 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 PDE6CP51160 858 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 SLC5A3P53794 718 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 MYL6P60660 151 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 BYSLQ13895 437 aaKnown RBP10.35□□□□□ -0.75
COL4A5-204ENST00000477429 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 GRAMD4Q6IC98 578 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 FAM173BQ6P4H8 233 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 DBX2Q6ZNG2 339 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms