RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DBN1Q16643 649 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PPP1R26Q5T8A7 1209 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 SH3PXD2AQ5TCZ1 1133 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ALLCQ8N6M5 410 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PIP4K2CQ8TBX8 421 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 RMDN2Q96LZ7 410 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 TNFSF13BQ9Y275 285 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 GRIN2DO15399 1336 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 UBA6A0AVT1 1052 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ARIH2O95376 493 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ANP32DO95626 131 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MLH1P40692 756 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 AQP5P55064 265 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 POLE2P56282 527 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 EML3Q32P44 896 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 SLC27A1Q6PCB7 646 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 GAD1Q99259 594 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 IPO11Q9UI26 975 aaKnown RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 KIAA1257Q9ULG3 409 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
COL27A1-204ENST00000477421 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-204ENST00000477421 SHOX2O60902 331 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 GMNNO75496 209 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 TGM2P21980 687 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 PDK2Q15119 407 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ITPRIPL1Q6GPH6 555 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 SPATA2LQ8IUW3 424 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 HS6ST3Q8IZP7 471 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 NXF3Q9H4D5 531 aaKnown RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 DDX43Q9NXZ2 648 aaKnown RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 SLC24A2Q9UI40 661 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 WDR27A2RRH5 827 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 CLDN5O00501 218 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 AIM2O14862 343 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 PAEPP09466 180 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 SERPINB3P29508 390 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ATICP31939 592 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ACADSBP45954 432 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 DCAF4L1Q3SXM0 396 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 LGMNQ99538 433 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 LPIN3Q9BQK8 851 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 OSBPL7Q9BZF2 842 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 MINDY3Q9H8M7 445 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ZDHHC18Q9NUE0 388 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 HMGXB4Q9UGU5 601 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 OR1G1P47890 313 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 NSUN2Q08J23 767 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 TSTA3Q13630 321 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 C1orf220Q5T0J3 134 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ANKRD22Q5VYY1 191 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 SRPK1Q96SB4 655 aaKnown RBP11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ELOVL4Q9GZR5 314 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 SP110Q9HB58 689 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 GRID1Q9ULK0 1009 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 DNM1LO00429 736 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 SPAG6O75602 509 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 UPP2O95045 317 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 MGAT1P26572 445 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 YWHAZP63104 245 aaKnown RBP11.4□□□□□ -0.58
COL27A1-204ENST00000477421 SLC6A3Q01959 620 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM130Q8N3G9 435 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 TMEM120AQ9BXJ8 343 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 RXFP1Q9HBX9 757 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.58
COL27A1-204ENST00000477421 ADA2Q9NZK5 511 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 SDR42E2A6NKP2 422 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 RGS20O76081 388 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 SERPINB4P48594 390 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 GTF2A2P52657 109 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 WSCD1Q658N2 575 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 BBS12Q6ZW61 710 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms