RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NETO1Q8TDF5 533 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 OTUB2Q96DC9 234 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 PNPLA8Q9NP80 782 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 GMIPQ9P107 970 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 COCHO43405 550 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 ADH1CP00326 375 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 RAD23BP54727 409 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 SLC8A3P57103 927 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 CREBRFQ8IUR6 639 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 PPM1KQ8N3J5 372 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 SLC4A11Q8NBS3 891 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 ZC3H10Q96K80 434 aaKnown RBP17.07■□□□□ 0.32
COL1A1-205ENST00000476387 ZFRQ96KR1 1074 aaKnown RBP17.07■□□□□ 0.32
COL1A1-205ENST00000476387 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
COL1A1-205ENST00000476387 HHIPQ96QV1 700 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 NACA2Q9H009 215 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 TLR8Q9NR97 1041 aaKnown RBP17.07■□□□□ 0.32
COL1A1-205ENST00000476387 CHORDC1Q9UHD1 332 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-205ENST00000476387 RALGAPA1Q6GYQ0 2036 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 KIAA1549LQ6ZVL6 1849 aa17.07■□□□□ 0.32
COL1A1-205ENST00000476387 K7EQS6 105 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 EPN2O95208 641 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 CD19P15391 556 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 DUSP16Q9BY84 665 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-205ENST00000476387 PCDHGA5Q9Y5G8 931 aa17.06■□□□□ 0.32
COL1A1-205ENST00000476387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-205ENST00000476387 SLC30A4O14863 429 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 ADH5P11766 374 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
COL1A1-205ENST00000476387 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
COL1A1-205ENST00000476387 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 HSF5Q4G112 596 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-205ENST00000476387 SGO2Q562F6 1265 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 ARHGAP17Q68EM7 881 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 KBTBD6Q86V97 674 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 TSTD1Q8NFU3 115 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 PNKPQ96T60 521 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 HESX1Q9UBX0 185 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 SCML2Q9UQR0 700 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 MYOFQ9NZM1 2061 aa17.05■□□□□ 0.32
COL1A1-205ENST00000476387 A0A0A0MRY4 1105 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 HHLA1C9JL84 531 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 CYP26A1O43174 497 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 APODP05090 189 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
COL1A1-205ENST00000476387 BCAT1P54687 386 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 GOLGA7BQ2TAP0 167 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 PLK5Q496M5 336 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 TMEM270Q6UE05 265 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
COL1A1-205ENST00000476387 MMP17Q9ULZ9 603 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 SH3BP1Q9Y3L3 701 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 EML5Q05BV3 1969 aa17.04■□□□□ 0.32
COL1A1-205ENST00000476387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 HOXC11O43248 304 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 TLR5O60602 858 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 KAT7O95251 611 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 ZNF806P0C7X5 589 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 VDRP11473 427 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 GRIA2P42262 883 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 DGKEP52429 567 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 KIF11P52732 1056 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 SEC13P55735 322 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 GCNT1Q02742 428 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 GAD2Q05329 585 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 ELF2Q15723 593 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 LY6G5CQ5SRR4 150 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 C11orf74Q86VG3 221 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 RASSF3Q86WH2 238 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 UBR7Q8N806 425 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 EHBP1Q8NDI1 1231 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 LMO3Q8TAP4 145 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 DUSP15Q9H1R2 295 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 ARRDC1-AS1Q9H2J1 176 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 CYLDQ9NQC7 956 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 TSPAN16Q9UKR8 245 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
COL1A1-205ENST00000476387 CNOT1A5YKK6 2376 aaKnown RBP17.03■□□□□ 0.32
COL1A1-205ENST00000476387 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.32
COL1A1-205ENST00000476387 RHOBTB1O94844 696 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 PAEPP09466 180 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-205ENST00000476387 ERCC5P28715 1186 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-205ENST00000476387 TNFRSF4P43489 277 aa17.02■□□□□ 0.32
COL1A1-205ENST00000476387 SLC6A11P48066 632 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms