RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MAPK13O15264 365 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 CACNG3O60359 315 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 TBX18O95935 607 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 GABRG2P18507 467 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 MAP3K7CLP57077 242 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-228ENST00000476267 NFIL3Q16649 462 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 LPCAT2Q7L5N7 544 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 TMEFF1Q8IYR6 380 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 CEP57L1Q8IYX8 460 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 ZNF513Q8N8E2 541 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-228ENST00000476267 HMGB4Q8WW32 186 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 PIGKQ92643 395 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 SPACA7Q96KW9 195 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 HNRNPABQ99729 332 aaKnown RBP13.86□□□□□ -0.19
MRPL55-228ENST00000476267 FBXO44Q9H4M3 255 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 APOBEC3GQ9HC16 384 aaKnown RBP13.86□□□□□ -0.19
MRPL55-228ENST00000476267 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 DEC1Q9P2X7 70 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 PILRBQ9UKJ0 227 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 SDK1Q7Z5N4 2213 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 CACNA1BQ00975 2339 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 TBC1D3BA6NDS4 549 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 CYP26A1O43174 497 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 MYL1P05976 194 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 IRF1P10914 325 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 P4HA1P13674 534 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 CEACAM1P13688 526 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 PFKFB1P16118 471 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 ZNF252P-AS1Q0IIN9 211 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 TRIM61Q5EBN2 209 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 C10orf76Q5T2E6 689 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 BTBD8Q5XKL5 378 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 KLHDC10Q6PID8 442 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 SLC23A3Q6PIS1 610 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 Q6ZNB5 142 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
MRPL55-228ENST00000476267 TTC30AQ86WT1 665 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 ACOX2Q99424 681 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 GABRG3Q99928 467 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 PNPLA8Q9NP80 782 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
MRPL55-228ENST00000476267 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 MYH10P35580 1976 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
MRPL55-228ENST00000476267 ADAMTS9Q9P2N4 1935 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 FAM237AA0A1B0GTK4 181 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 PRRT4C9JH25 899 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 PROS1P07225 676 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 FAM200BP0CF97 657 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 CMA1P23946 247 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 NTSR1P30989 418 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 HOXD12P35452 270 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 ANO4Q32M45 955 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 PREPLQ4J6C6 727 aaPredicted RBP13.84□□□□□ -0.19
MRPL55-228ENST00000476267 EGFLAMQ63HQ2 1017 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 ARMCX6Q7L4S7 300 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 ZNF276Q8N554 614 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.84□□□□□ -0.19
MRPL55-228ENST00000476267 CALCOCO1Q9P1Z2 691 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
MRPL55-228ENST00000476267 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
MRPL55-228ENST00000476267 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
MRPL55-228ENST00000476267 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 A0A1B0GVL5 298 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 CILPO75339 1184 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 RHOBTB3O94955 611 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 CISD3P0C7P0 127 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 HOXB2P14652 356 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 TYRP14679 529 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 ENGP17813 658 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 NDUFV2P19404 249 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 ITPKAP23677 461 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 ADORA2BP29275 332 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.2
MRPL55-228ENST00000476267 PIK3CAP42336 1068 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 DPP6P42658 865 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 KIF11P52732 1056 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 ENPEPQ07075 957 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 LMAN2Q12907 356 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 BYSLQ13895 437 aaKnown RBP13.83□□□□□ -0.2
MRPL55-228ENST00000476267 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 GRAMD4Q6IC98 578 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 KIAA1211LQ6NV74 962 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 TOGARAM2Q6ZUX3 1019 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 SCD5Q86SK9 330 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 CAPN10Q9HC96 672 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms