RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 RAB25P57735 213 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MTM1Q13496 603 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MXD4Q14582 209 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SDE2Q6IQ49 451 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 LRRC8DQ7L1W4 858 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF572Q7Z3I7 529 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 FAM151AQ8WW52 585 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CAPSLQ8WWF8 208 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TAAR1Q96RJ0 339 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MANSC1Q9H8J5 431 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF70Q9UC06 446 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ATP6V1HQ9UI12 483 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TMX2Q9Y320 296 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SNED1Q8TER0 1413 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PSMD10O75832 226 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 RARAP10276 462 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 RALAP11233 206 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TBXAS1P24557 533 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ARSEP51690 589 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MTTPP55157 894 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 BAATQ14032 418 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 KCTD21Q4G0X4 260 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF544Q6NX49 715 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TUBA3EQ6PEY2 450 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 C4orf22Q6V702 233 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZBTB49Q6ZSB9 765 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 FNIP1Q8TF40 1166 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PPP1R2P1Q96PQ5 205 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CDC42EP4Q9H3Q1 356 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC9A2Q9UBY0 812 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ENOPH1Q9UHY7 261 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 IGKV6D-41A0A0C4DH26 115 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 KDM4FA0A1W2PPD8 638 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MYL2P10916 166 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF23P17027 643 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SFNP31947 248 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 RARRES1P49788 294 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ERFP50548 548 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SOX10P56693 466 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC34A1Q06495 639 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 EFHC1Q5JVL4 640 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZFP1Q6P2D0 407 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC5A5Q92911 643 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TATDN2Q93075 761 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CHID1Q9BWS9 393 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 IDI2Q9BXS1 227 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 REXO4Q9GZR2 422 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM8AQ9HCN3 771 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ERVK-5Q9HDB9 667 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 AJAP1Q9UKB5 411 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 MYRFQ9Y2G1 1151 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PCDHA2Q9Y5H9 948 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 HEY1Q9Y5J3 304 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 LINC00854A0A1B0GVQ3 168 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 KIAA0391O15091 583 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 H2AFYO75367 372 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 AP1G2O75843 785 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CALCAP01258 141 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 RRM1P23921 792 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ACAD10Q6JQN1 1059 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PRELID2Q8N945 189 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SETD9Q8NE22 299 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF668Q96K58 619 aaPredicted RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CYLDQ9NQC7 956 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 TBX20Q9UMR3 447 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 PCDHB2Q9Y5E7 798 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 SF3B1O75533 1304 aaKnown RBP eCLIP6.3□□□□□ -1.41e-7■■■■■ 29.5
HNRNPU-208ENST00000475997 ADAMTS7Q9UKP4 1686 aa6.3□□□□□ -1.4
HNRNPU-208ENST00000475997 INO80B-WBP1J3KQ70 363 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 STX11O75558 287 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CYP3A4P08684 503 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MAGEA10P43363 369 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RBBP7Q16576 425 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 P3H1Q32P28 736 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MDH1BQ5I0G3 518 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 DACT2Q5SW24 774 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SNRNP48Q6IEG0 339 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SV2AQ7L0J3 742 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 STX12Q86Y82 276 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 THNSL1Q8IYQ7 743 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TTLL6Q8N841 843 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM143Q96AN5 459 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 INO80BQ9C086 356 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 POLR3FQ9H1D9 316 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 VTA1Q9NP79 307 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms