RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RITA1Q96K30 269 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 SELENOOQ9BVL4 669 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 A0A1W2PPC4 97 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 TCRBV5S1A1TA0A578 114 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 CCNT2O60583 730 aaKnown RBP7.56□□□□□ -1.2
SMC5-203ENST00000475540 LATS1O95835 1130 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 IDEP14735 1019 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 YY1P25490 414 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 TBX4P57082 545 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 PICALMQ13492 652 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 FAXCQ5TGI0 409 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 CRTC1Q6UUV9 634 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 MBD3L2Q8NHZ7 208 aaPredicted RBP7.56□□□□□ -1.2
SMC5-203ENST00000475540 ABHD5Q8WTS1 349 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 EIF2AQ9BY44 585 aaKnown RBP7.56□□□□□ -1.2
SMC5-203ENST00000475540 AS3MTQ9HBK9 375 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 ARNT2Q9HBZ2 717 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 GJB4Q9NTQ9 266 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 COL15A1P39059 1388 aa7.56□□□□□ -1.2
SMC5-203ENST00000475540 PPP6CO00743 305 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 USP1O94782 785 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 TUBB4AP04350 444 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 CDK4P11802 303 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 MPGP29372 298 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 MCM5P33992 734 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 KRTAP1-1Q07627 177 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 LONRF1Q17RB8 773 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 ZKSCAN2Q63HK3 967 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 TXLNBQ8N3L3 684 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
SMC5-203ENST00000475540 BRI3BPQ8WY22 251 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 SNX27Q96L92 541 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 HS6ST2Q96MM7 605 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 ASIC5Q9NY37 505 aa7.55□□□□□ -1.2
SMC5-203ENST00000475540 A0A087WZ62 844 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 KCNQ3O43525 872 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 TNFSF4P23510 183 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 ADRA1DP25100 572 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 AK2P54819 239 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 CFHR3Q02985 330 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 DEUP1Q05D60 604 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 EZH2Q15910 746 aaKnown RBP7.54□□□□□ -1.2
SMC5-203ENST00000475540 CEP78Q5JTW2 689 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 CCSAPQ6IQ19 270 aaPredicted RBP7.54□□□□□ -1.2
SMC5-203ENST00000475540 HIBCHQ6NVY1 386 aaPredicted RBP7.54□□□□□ -1.2
SMC5-203ENST00000475540 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 PNPLA1Q8N8W4 532 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 FAM71DQ8N9W8 422 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 C8orf58Q8NAV2 365 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 PARD3BQ8TEW8 1205 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 C5orf34Q96MH7 638 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
SMC5-203ENST00000475540 TMEM232C9JQI7 657 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 CYP2A6P11509 494 aaPredicted RBP7.53□□□□□ -1.2
SMC5-203ENST00000475540 APEHP13798 732 aaKnown RBP7.53□□□□□ -1.2
SMC5-203ENST00000475540 EPHB2P29323 1055 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 GPS1Q13098 491 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 MRNIPQ6NTE8 343 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 KRT73Q86Y46 540 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 P3H2Q8IVL5 708 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 SUN3Q8TAQ9 357 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 TNIP3Q96KP6 325 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 CCDC138Q96M89 665 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 RIPOR3Q96MK2 946 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 USP29Q9HBJ7 922 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 CEP83Q9Y592 693 aa7.53□□□□□ -1.2
SMC5-203ENST00000475540 ADAMTS3O15072 1205 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 FGF18O76093 207 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 WDR47O94967 919 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 PRR35P0CG20 571 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 KELP23276 732 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 TM4SF4P48230 202 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 TXNL4AP83876 142 aaKnown RBP7.52□□□□□ -1.21
SMC5-203ENST00000475540 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 VSTM1Q6UX27 236 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 KIAA0408Q6ZU52 694 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 LINC01465Q8N7H1 131 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 MAFAQ8NHW3 353 aaPredicted RBP7.52□□□□□ -1.21
SMC5-203ENST00000475540 CINPQ9BW66 212 aaPredicted RBP7.52□□□□□ -1.21
SMC5-203ENST00000475540 NRIP3Q9NQ35 241 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
SMC5-203ENST00000475540 ZMYND8Q9ULU4 1186 aaPredicted RBP7.52□□□□□ -1.21
SMC5-203ENST00000475540 PHTF1Q9UMS5 762 aa7.52□□□□□ -1.21
SMC5-203ENST00000475540 RASA4BC9J798 803 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 H3BNC9 293 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 RASA4O43374 803 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 NCK2O43639 380 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 HARSP12081 509 aaKnown RBP7.51□□□□□ -1.21
SMC5-203ENST00000475540 HTR7P34969 479 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 NEK3P51956 506 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 DGKQP52824 942 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 FHL3Q13643 280 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 LARS2Q15031 903 aaKnown RBP7.51□□□□□ -1.21
SMC5-203ENST00000475540 ACOX1Q15067 660 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms