RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 STEAP1Q9UHE8 339 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 CA12O43570 354 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
LTN1-204ENST00000475344 ZNF91Q05481 1191 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 RRAGBQ5VZM2 374 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 USP49Q70CQ1 688 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 P3H2Q8IVL5 708 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 FSTL5Q8N475 847 aaPredicted RBP5.5□□□□□ -1.53
LTN1-204ENST00000475344 VPS50Q96JG6 964 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 ZNF668Q96K58 619 aaPredicted RBP5.5□□□□□ -1.53
LTN1-204ENST00000475344 SNX22Q96L94 193 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 DKK4Q9UBT3 224 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 CORO2BQ9UQ03 480 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 HPSEQ9Y251 543 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 SLC27A6Q9Y2P4 619 aa5.5□□□□□ -1.53
LTN1-204ENST00000475344 F8W8V4 182 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 CLIC1O00299 241 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 MT-ND5P03915 603 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 CYP19A1P11511 503 aaPredicted RBP5.49□□□□□ -1.53
LTN1-204ENST00000475344 RHCEP18577 417 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 EIF4A1P60842 406 aaKnown RBP5.49□□□□□ -1.53
LTN1-204ENST00000475344 RHDQ02161 417 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 GBX1Q14549 363 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 ZNF260Q3ZCT1 412 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 MEX3CQ5U5Q3 659 aaKnown RBP5.49□□□□□ -1.53
LTN1-204ENST00000475344 RNF44Q7L0R7 432 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 FAM71DQ8N9W8 422 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 PNISRQ8TF01 805 aaKnown RBP5.49□□□□□ -1.53
LTN1-204ENST00000475344 MAP4K1Q92918 833 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 FAM83DQ9H4H8 585 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 AS3MTQ9HBK9 375 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 TRIM36Q9NQ86 728 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 PRDM11Q9NQV5 511 aa5.49□□□□□ -1.53
LTN1-204ENST00000475344 FYB1O15117 783 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 HRGP04196 525 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 ADRA1DP25100 572 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 HOXD9P28356 352 aaPredicted RBP5.48□□□□□ -1.53
LTN1-204ENST00000475344 RBL1P28749 1068 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 TXNL4AP83876 142 aaKnown RBP5.48□□□□□ -1.53
LTN1-204ENST00000475344 CFHR3Q02985 330 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 SLC14A1Q13336 389 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 SEC23BQ15437 767 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 ST3GAL2Q16842 350 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 TMTC4Q5T4D3 741 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 MANEALQ5VSG8 457 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 MZT2AQ6P582 158 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 LINC01465Q8N7H1 131 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 C12orf76Q8N812 135 aaPredicted RBP5.48□□□□□ -1.53
LTN1-204ENST00000475344 TTC8Q8TAM2 541 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 TIFAQ96CG3 184 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 HMCESQ96FZ2 354 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 ZC3H10Q96K80 434 aaKnown RBP5.48□□□□□ -1.53
LTN1-204ENST00000475344 AFG3L2Q9Y4W6 797 aa5.48□□□□□ -1.53
LTN1-204ENST00000475344 A8MVJ9 347 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 FGBP02675 491 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 TMEM225BP0DP42 221 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 ATF7P17544 494 aaPredicted RBP5.47□□□□□ -1.53
LTN1-204ENST00000475344 NR4A2P43354 598 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 SEMA5AQ13591 1074 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 PNPLA1Q8N8W4 532 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 PNPLA8Q9NP80 782 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 TMEM184CQ9NVA4 438 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 MTMR4Q9NYA4 1195 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 KLHL42Q9P2K6 505 aa5.47□□□□□ -1.53
LTN1-204ENST00000475344 H3BNC9 293 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 SOCS2O14508 198 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 PQBP1O60828 265 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 ANXA2P07355 339 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 YPEL5P62699 121 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 GALEQ14376 348 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 KPNB1Q14974 876 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 RBMS2Q15434 407 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 PFKFB3Q16875 520 aaPredicted RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 TMEM63BQ5T3F8 832 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 MRPL10Q7Z7H8 261 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 LIX1LQ8IVB5 337 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 SDR16C5Q8N3Y7 309 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 NRACQ8N912 160 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 IQCDQ96DY2 449 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 EDC3Q96F86 508 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 LRRC46Q96FV0 321 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 MSLNLQ96KJ4 702 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
LTN1-204ENST00000475344 BRIP1Q9BX63 1249 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 NUP62CLQ9H1M0 184 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 SLC25A32Q9H2D1 315 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 MAFFQ9ULX9 164 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 VPS4AQ9UN37 437 aa5.46□□□□□ -1.54
LTN1-204ENST00000475344 RHPN2P1A8MT19 583 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 PRAMEF2O60811 474 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 GPC5P78333 572 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 CCDC15Q0P6D6 951 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 AWAT2Q6E213 333 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 TECPR1Q7Z6L1 1165 aa5.45□□□□□ -1.54
LTN1-204ENST00000475344 FMNL3Q8IVF7 1028 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms