RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 STX8Q9UNK0 236 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ERVK-11Q9UQG0 969 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 SPEF1Q9Y4P9 236 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 PCDHA9Q9Y5H5 950 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 RALGAPBQ86X10 1494 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 CHD2O14647 1828 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 XIRP1Q702N8 1843 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SSH2Q76I76 1423 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 FUOMA2VDF0 154 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 B4E1Z4 1266 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 H3BQV1 296 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 DLL1O00548 723 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RANBP6O60518 1105 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GMNNO75496 209 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RFPL1O75677 317 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 PRKD3O94806 890 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 UBTFL6P0CB48 400 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 HSPA6P17066 643 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 HOXC12P31275 282 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 PTGS2P35354 604 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 NUDT1P36639 197 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 ECI1P42126 302 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 ARHGDIBP52566 201 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 VBP1P61758 197 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RPP38P78345 283 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GUCY1A3Q02108 690 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GRSF1Q12849 480 aaKnown RBP eCLIP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RALGDSQ12967 914 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GRB10Q13322 594 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 PTK2BQ14289 1009 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 CNGA2Q16280 664 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 ABCB5Q2M3G0 1257 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GFOD2Q3B7J2 385 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 WASHC2DQ5SRD0 308 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 NOL9Q5SY16 702 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 HAUS3Q68CZ6 603 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 IQSEC1Q6DN90 963 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 CEP85Q6P2H3 762 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RANBP10Q6VN20 620 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 USP51Q70EK9 711 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 BRINP3Q76B58 766 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 NET1Q7Z628 596 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 AKAP14Q86UN6 197 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 NLRP10Q86W26 655 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 HEATR4Q86WZ0 1026 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SFR1Q86XK3 245 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 GATAD2AQ86YP4 633 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC44A2Q8IWA5 706 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 DMRTC2Q8IXT2 367 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC38A6Q8IZM9 456 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 TTLQ8NG68 377 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 VWCEQ96DN2 955 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 C11orf24Q96F05 449 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 REXO5Q96IC2 774 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 CEP170P1Q96L14 293 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 ATP6V1G3Q96LB4 118 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 KREMEN1Q96MU8 473 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 AIFM3Q96NN9 605 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 IFIH1Q9BYX4 1025 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 RAD21L1Q9H4I0 556 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 EHD1Q9H4M9 534 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 HAUS4Q9H6D7 363 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 CNOT10Q9H9A5 744 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 DIABLOQ9NR28 239 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SDHAF3Q9NRP4 125 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 DDX43Q9NXZ2 648 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 MRPL39Q9NYK5 338 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SELENONQ9NZV5 590 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 FNIP2Q9P278 1114 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 UVRAGQ9P2Y5 699 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC7A8Q9UHI5 535 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 ATP6V1HQ9UI12 483 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 FBXL21Q9UKT6 434 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 COQ6Q9Y2Z9 468 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 TTC21AQ8NDW8 1320 aa6.24□□□□□ -1.41
ECHDC1-215ENST00000475319 PNPLA6Q8IY17 1366 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KAT6BQ8WYB5 2073 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 PIK3C2GO75747 1445 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 CDK12Q9NYV4 1490 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 A0A087WZG4 1122 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 C1orf232A0A0U1RR37 186 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 MAGEB16A2A368 324 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 WDR91A4D1P6 747 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ZSCAN5BA6NJL1 495 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KPNA5O15131 536 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 BET1O15155 118 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ATP5HO75947 161 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 EPN2O95208 641 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ESRRBO95718 433 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KRT7P08729 469 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TPBGLP0DKB5 382 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 PIM1P11309 404 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC26A3P40879 764 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ADCYAP1R1P41586 468 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 PRCPP42785 496 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 RGS7P49802 495 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms