RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CEP57L1Q8IYX8 460 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 KIAA0895Q8NCT3 520 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 CSNK1G1Q9HCP0 422 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 TLR8Q9NR97 1041 aaKnown RBP26.33■■□□□ 1.81
TMEM54-205ENST00000475208 FAM49BQ9NUQ9 324 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 DNAJC17Q9NVM6 304 aaKnown RBP26.33■■□□□ 1.81
TMEM54-205ENST00000475208 CALCOCO1Q9P1Z2 691 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 PILRBQ9UKJ0 227 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 KLRC4O43908 158 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 TOP3BO95985 862 aaKnown RBP26.32■■□□□ 1.8
TMEM54-205ENST00000475208 NTSR1P30989 418 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 RPL6Q02878 288 aaKnown RBP26.32■■□□□ 1.8
TMEM54-205ENST00000475208 STK4Q13043 487 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 SGSM1Q2NKQ1 1148 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 ZACNQ401N2 412 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 PEAR1Q5VY43 1037 aaPredicted RBP26.32■■□□□ 1.8
TMEM54-205ENST00000475208 EGFLAMQ63HQ2 1017 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 GRAMD4Q6IC98 578 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 SLC23A3Q6PIS1 610 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 SLC9A9Q8IVB4 645 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 CRYBG2Q8N1P7 616 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 EXOC1Q9NV70 894 aa26.32■■□□□ 1.8
TMEM54-205ENST00000475208 ASCC3Q8N3C0 2202 aaKnown RBP26.32■■□□□ 1.8
TMEM54-205ENST00000475208 NEDD8-MDP1E9PL57 170 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 AP5Z1O43299 807 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 GREM1O60565 184 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 TBX18O95935 607 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 CFIP05156 583 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 HOXD12P35452 270 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 SLC36A4Q6YBV0 504 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 HTR3DQ70Z44 454 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 C12orf29Q8N999 325 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 KLF16Q9BXK1 252 aaPredicted RBP26.31■■□□□ 1.8
TMEM54-205ENST00000475208 ADAM33Q9BZ11 813 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 SERTAD1Q9UHV2 236 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 STARD13Q9Y3M8 1113 aa26.31■■□□□ 1.8
TMEM54-205ENST00000475208 GON4LQ3T8J9 2241 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 A0A1W2PQF6 199 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 CACNG3O60359 315 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 F13A1P00488 732 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 RPN1P04843 607 aaKnown RBP26.3■■□□□ 1.8
TMEM54-205ENST00000475208 FAM200BP0CF97 657 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 ZSCAN22P10073 491 aaPredicted RBP26.3■■□□□ 1.8
TMEM54-205ENST00000475208 ADORA2BP29275 332 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 ASPAP45381 313 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 SPOPLQ6IQ16 392 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 GPRIN1Q7Z2K8 1008 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 UNC93AQ86WB7 457 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 DEFB119Q8N690 84 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 TAF4BQ92750 862 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 XPO6Q96QU8 1125 aaKnown RBP26.3■■□□□ 1.8
TMEM54-205ENST00000475208 BBS2Q9BXC9 721 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 KCTD10Q9H3F6 313 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 SLC32A1Q9H598 525 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 CYLDQ9NQC7 956 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 FSCN3Q9NQT6 498 aa26.3■■□□□ 1.8
TMEM54-205ENST00000475208 LSM7Q9UK45 103 aaKnown RBP26.3■■□□□ 1.8
TMEM54-205ENST00000475208 MYH10P35580 1976 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 CYP26A1O43174 497 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 ASS1P00966 412 aaKnown RBP26.29■■□□□ 1.8
TMEM54-205ENST00000475208 NR3C1P04150 777 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 SLFN14P0C7P3 912 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 TYRP14679 529 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 PIK3CAP42336 1068 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 GOLGA8FQ08AF8 430 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 GOLGA8DPQ0D2H9 430 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 KMT5BQ4FZB7 885 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 TPGS1Q6ZTW0 290 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 SV2AQ7L0J3 742 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 CHPFQ8IZ52 775 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 TMC2Q8TDI7 906 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 TMEM174Q8WUU8 243 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 JAKMIP2Q96AA8 810 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 ACOX2Q99424 681 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 SCNM1Q9BWG6 230 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 TMEM121BQ9BXQ6 578 aaPredicted RBP26.29■■□□□ 1.8
TMEM54-205ENST00000475208 OSER1Q9NX31 292 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 ZMIZ1Q9ULJ6 1067 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 SCML2Q9UQR0 700 aa26.29■■□□□ 1.8
TMEM54-205ENST00000475208 ACTN4O43707 911 aaKnown RBP26.28■■□□□ 1.8
TMEM54-205ENST00000475208 ATP5C1P36542 298 aaKnown RBP26.28■■□□□ 1.8
TMEM54-205ENST00000475208 PI4KAP42356 2102 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 ATXN3P54252 364 aaPredicted RBP26.28■■□□□ 1.8
TMEM54-205ENST00000475208 DUOXA1Q1HG43 343 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 CEP135Q66GS9 1140 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 CLEC20AQ6ZU45 233 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 CEP76Q8TAP6 659 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 ERLEC1Q96DZ1 483 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 PAGE5Q96GU1 130 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 BACH2Q9BYV9 841 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.28■■□□□ 1.81e-9■■■■■ 76.9
TMEM54-205ENST00000475208 MARK1Q9P0L2 795 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 WDR35Q9P2L0 1181 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 SLC6A14Q9UN76 642 aa26.28■■□□□ 1.8
TMEM54-205ENST00000475208 IGHV1OR15-9A0A0B4J2B8 117 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 PDXKO00764 312 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 ZBTB24O43167 697 aaPredicted RBP26.27■■□□□ 1.8
TMEM54-205ENST00000475208 HLA-DRAP01903 254 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 NDUFV2P19404 249 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 ZNF33AQ06730 810 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms