RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SLC6A11P48066 632 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 NDST1P52848 882 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 MFAP3P55082 362 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 UBASH3AP57075 661 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 FANCCQ00597 558 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 NR1H3Q13133 447 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CUL2Q13617 745 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 PUM1Q14671 1186 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLIP2-204ENST00000474962 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 WDR5BQ86VZ2 330 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 GPR161Q8N6U8 529 aaKnown RBP12.51□□□□□ -0.41
CLIP2-204ENST00000474962 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CD101Q93033 1021 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 HSD3B7Q9H2F3 369 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
CLIP2-204ENST00000474962 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 LGALS16A8MUM7 142 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 K7EQS6 105 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 AXIN1O15169 862 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 COCHO43405 550 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 AP1G2O75843 785 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 OLFM2O95897 454 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 CCDC130P13994 396 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 PFKLP17858 780 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 PON1P27169 355 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 ASPAP45381 313 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 PDE6CP51160 858 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 ATXN1P54253 815 aaKnown RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 RHBDF2Q6PJF5 856 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 CEP68Q76N32 757 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 RRAGAQ7L523 313 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 ENOSF1Q7L5Y1 443 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 UNC93AQ86WB7 457 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 SFTPA1Q8IWL2 248 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 ZMIZ2Q8NF64 920 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 SLC2A14Q8TDB8 520 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 SMOQ99835 787 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 LSM14BQ9BX40 385 aaKnown RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 FAM124BQ9H5Z6 455 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
CLIP2-204ENST00000474962 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
CLIP2-204ENST00000474962 PTPRDP23468 1912 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 RTN3O95197 1032 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-204ENST00000474962 NFATC1O95644 943 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-204ENST00000474962 OPRD1P41143 372 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 SLC5A3P53794 718 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 SEC13P55735 322 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 GCNT1Q02742 428 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 MESP2Q0VG99 397 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 DHCR24Q15392 516 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 SYCP1Q15431 976 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 FBXO43Q4G163 708 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 C2orf27AQ580R0 203 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-204ENST00000474962 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 WBP2Q969T9 261 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 HHIPQ96QV1 700 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 TWNKQ96RR1 684 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 FAM49BQ9NUQ9 324 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 GMIPQ9P107 970 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 PCDHB4Q9Y5E5 795 aa12.49□□□□□ -0.41
CLIP2-204ENST00000474962 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
CLIP2-204ENST00000474962 TBX18O95935 607 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 CYP17A1P05093 508 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 KRT5P13647 590 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 ADORA2BP29275 332 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 USP8P40818 1118 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 LMNB2Q03252 620 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 CCDC6Q16204 474 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 ZNF394Q53GI3 561 aa12.48□□□□□ -0.41
CLIP2-204ENST00000474962 EMC10Q5UCC4 262 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms