RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 BTBD8Q5XKL5 378 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 HTR3DQ70Z44 454 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 RASSF3Q86WH2 238 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 ETFBKMTQ8IXQ9 262 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 C12orf50Q8NA57 414 aaPredicted RBP22.34■■□□□ 1.17
TRA2A-204ENST00000474586 IL17RCQ8NAC3 791 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 FBXL13Q8NEE6 735 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 ERCC4Q92889 916 aaPredicted RBP22.34■■□□□ 1.17
TRA2A-204ENST00000474586 HEXIM2Q96MH2 286 aaKnown RBP22.34■■□□□ 1.17
TRA2A-204ENST00000474586 DUSP9Q99956 384 aaKnown RBP22.34■■□□□ 1.17
TRA2A-204ENST00000474586 DNAI2Q9GZS0 605 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 PNPLA8Q9NP80 782 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 RXFP3Q9NSD7 469 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 RAB20Q9NX57 234 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 PCDHGA5Q9Y5G8 931 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 PCDHA5Q9Y5H7 936 aa22.34■■□□□ 1.17
TRA2A-204ENST00000474586 GOLGA6L4A6NEF3 574 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 MDM4O15151 490 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 HOXC11O43248 304 aaPredicted RBP22.33■■□□□ 1.17
TRA2A-204ENST00000474586 STX10O60499 249 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 TULP3O75386 442 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 RHOBTB1O94844 696 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 RARGP13631 454 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 GBP1P32455 592 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 MPLP40238 635 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 TNFRSF4P43489 277 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 KIR2DL1P43626 348 aaPredicted RBP22.33■■□□□ 1.17
TRA2A-204ENST00000474586 KIF11P52732 1056 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 USP39Q53GS9 565 aaKnown RBP22.33■■□□□ 1.17
TRA2A-204ENST00000474586 ZNF658Q5TYW1 1059 aaPredicted RBP22.33■■□□□ 1.17
TRA2A-204ENST00000474586 ENGASEQ8NFI3 743 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 MDGA1Q8NFP4 955 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 TATDN2Q93075 761 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 CNOT6LQ96LI5 555 aaKnown RBP22.33■■□□□ 1.17
TRA2A-204ENST00000474586 DUSP16Q9BY84 665 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 CISHQ9NSE2 258 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 NCOR2Q9Y618 2525 aa22.33■■□□□ 1.17
TRA2A-204ENST00000474586 TBC1D3BA6NDS4 549 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 TRIM24O15164 1050 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 ANKRD40Q6AI12 368 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 SCD5Q86SK9 330 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 GSDMAQ96QA5 445 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 ARID3AQ99856 593 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.32■■□□□ 1.16
TRA2A-204ENST00000474586 DEC1Q9P2X7 70 aa22.32■■□□□ 1.16
TRA2A-204ENST00000474586 ADAM23O75077 832 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 PMS1P54277 932 aaKnown RBP22.31■■□□□ 1.16
TRA2A-204ENST00000474586 RAD23BP54727 409 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 CREB5Q02930 508 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 BECN1Q14457 450 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 HSF5Q4G112 596 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-204ENST00000474586 CBWD6Q4V339 395 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 DCAF17Q5H9S7 520 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-204ENST00000474586 CBWD3Q5JTY5 395 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 EOGTQ5NDL2 527 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 CBWD5Q5RIA9 395 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 C10orf120Q5SQS8 335 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 TCERG1LQ5VWI1 586 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 SLC4A11Q8NBS3 891 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 TMEM176AQ96HP8 235 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 FAXDC2Q96IV6 333 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 TSG101Q99816 390 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 VPS45Q9NRW7 570 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 NAGPAQ9UK23 515 aa22.31■■□□□ 1.16
TRA2A-204ENST00000474586 LSM7Q9UK45 103 aaKnown RBP22.31■■□□□ 1.16
TRA2A-204ENST00000474586 SPTBN2O15020 2390 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 ALDH1A2O94788 518 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 SMC2O95347 1197 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 BCKDHBP21953 392 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 GOLGA8FQ08AF8 430 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 GOLGA8DPQ0D2H9 430 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 COBLL1Q53SF7 1204 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 KLHDC10Q6PID8 442 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 TPGS1Q6ZTW0 290 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 CCDC186Q7Z3E2 898 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 TTC39CQ8N584 583 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 SMARCE1Q969G3 411 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 DNMT3LQ9UJW3 386 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 USP3Q9Y6I4 520 aa22.3■■□□□ 1.16
TRA2A-204ENST00000474586 BCLAF3A2AJT9 711 aaKnown RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 TRIM49BA6NDI0 452 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 NEDD8-MDP1E9PL57 170 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 SLC16A3O15427 465 aaKnown RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 PLA2G4AP47712 749 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 NUCB2P80303 420 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 FKBP3Q00688 224 aaKnown RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 PPM1JQ5JR12 505 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 C10orf76Q5T2E6 689 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 PMS2CLQ68D20 193 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 TCEAL6Q6IPX3 200 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 ZC3H3Q8IXZ2 948 aaKnown RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 ABCA7Q8IZY2 2146 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 OLIG1Q8TAK6 271 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 SPATA20Q8TB22 786 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 TCEAL3Q969E4 200 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 BBS2Q9BXC9 721 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 POLMQ9NP87 494 aaPredicted RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 HCN2Q9UL51 889 aa22.29■■□□□ 1.16
TRA2A-204ENST00000474586 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
TRA2A-204ENST00000474586 CAVIN2O95810 425 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms