RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CRY1Q16526 586 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 EOGTQ5NDL2 527 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 GPRIN1Q7Z2K8 1008 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 RASSF3Q86WH2 238 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 C12orf40Q86WS4 652 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 CCDC33Q8N5R6 958 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 SEMA4DQ92854 862 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 SMARCE1Q969G3 411 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 CNOT6LQ96LI5 555 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 TIGD1Q96MW7 591 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 CDK5RAP1Q96SZ6 601 aaKnown RBP21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 CISHQ9NSE2 258 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 DEC1Q9P2X7 70 aa21.46■■□□□ 1.03
PDLIM4-206ENST00000474421 PGFP49763 221 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 SLC8A3P57103 927 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 LRRC63Q05C16 580 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 KDSRQ06136 332 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 STIM1Q13586 685 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 ANO4Q32M45 955 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 AASDHQ4L235 1098 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 PPP1R26Q5T8A7 1209 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 TCERG1LQ5VWI1 586 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 CCDC186Q7Z3E2 898 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 TRMT11Q7Z4G4 463 aaKnown RBP21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 ETFBKMTQ8IXQ9 262 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 ZNF276Q8N554 614 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 ENGASEQ8NFI3 743 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 SPATA20Q8TB22 786 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 TMEM176AQ96HP8 235 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 UBXN6Q9BZV1 441 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 DUSP15Q9H1R2 295 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 POLMQ9NP87 494 aaPredicted RBP21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 DNMT3LQ9UJW3 386 aa21.45■■□□□ 1.02
PDLIM4-206ENST00000474421 A0A1W2PQH9 124 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 TBC1D3BA6NDS4 549 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 KLF8O95600 359 aaPredicted RBP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 TBX18O95935 607 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 RALAP11233 206 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 RARGP13631 454 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 TIE1P35590 1138 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 PLA2G4AP47712 749 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 ZNF394Q53GI3 561 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 DCAF17Q5H9S7 520 aaPredicted RBP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 PLA2G2CQ5R387 149 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 ANO7Q6IWH7 933 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 TMEM25Q86YD3 366 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 ZC3H3Q8IXZ2 948 aaKnown RBP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 PHTF2Q8N3S3 785 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 ALLCQ8N6M5 410 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 IL17RCQ8NAC3 791 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 TXNDC5Q8NBS9 432 aaKnown RBP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 DDX1Q92499 740 aaKnown RBP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 VPS45Q9NRW7 570 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 OSER1Q9NX31 292 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 CLIC5Q9NZA1 410 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 WDR35Q9P2L0 1181 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 NAGPAQ9UK23 515 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 USP3Q9Y6I4 520 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 SPTBN2O15020 2390 aa21.44■■□□□ 1.02
PDLIM4-206ENST00000474421 NCOR2Q9Y618 2525 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 DCDC2BA2VCK2 349 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 TULP3O75386 442 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 GBP1P32455 592 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 MPLP40238 635 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 PPP1R2P41236 205 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 KIR2DL1P43626 348 aaPredicted RBP21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 LIMK1P53667 647 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 YWHAEP62258 255 aaKnown RBP21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 C10orf120Q5SQS8 335 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 ARHGAP17Q68EM7 881 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 ANKRD40Q6AI12 368 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 ARHGAP18Q8N392 663 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 NAT16Q8N8M0 369 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 SLC4A11Q8NBS3 891 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 XPO6Q96QU8 1125 aaKnown RBP21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 NMUR1Q9HB89 426 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 ARMCX3Q9UH62 379 aaPredicted RBP21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
PDLIM4-206ENST00000474421 PSMA7O14818 248 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 DCLK1O15075 740 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 GREM1O60565 184 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 RAD23BP54727 409 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 MESP2Q0VG99 397 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 THADAQ6YHU6 1953 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 SFTPA1Q8IWL2 248 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 ELOA2Q8IYF1 753 aaPredicted RBP21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 ABCA7Q8IZY2 2146 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 TERB1Q8NA31 727 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 MDGA1Q8NFP4 955 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 WBP2Q969T9 261 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 BBS2Q9BXC9 721 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 TPSD1Q9BZJ3 242 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 METTL14Q9HCE5 456 aaKnown RBP21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 MARK1Q9P0L2 795 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 ZNF510Q9Y2H8 683 aa21.42■■□□□ 1.02
PDLIM4-206ENST00000474421 SGK1O00141 431 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 GDF9O60383 454 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 CHRM1P11229 460 aaPredicted RBP21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 BYSLQ13895 437 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms