RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GRIK2Q13002 908 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 MAPRE1Q15691 268 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 PLEKHG6Q3KR16 790 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 L1TD1Q5T7N2 865 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 EGFLAMQ63HQ2 1017 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 DPH6Q7L8W6 267 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 GLRX5Q86SX6 157 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 SLCO6A1Q86UG4 719 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 NAT16Q8N8M0 369 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 KRI1Q8N9T8 703 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TRIML1Q8N9V2 468 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 OR5B17Q8NGF7 314 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 OTUB2Q96DC9 234 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF419Q96HQ0 510 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 C8orf48Q96LL4 319 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 SLITRK1Q96PX8 696 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 ACCSQ96QU6 501 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 UBL7Q96S82 380 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 KIF2CQ99661 725 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 DUSP9Q99956 384 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CBWD1Q9BRT8 395 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 MRPL44Q9H9J2 332 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 PDE11AQ9HCR9 933 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CD93Q9NPY3 652 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CACNA2D2Q9NY47 1150 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 EHD2Q9NZN4 543 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TBC1D14Q9P2M4 693 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 DEC1Q9P2X7 70 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 DKK4Q9UBT3 224 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 SEL1LQ9UBV2 794 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CYP8B1Q9UNU6 501 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 RAXQ9Y2V3 346 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 STARD13Q9Y3M8 1113 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 NME7Q9Y5B8 376 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 PLXNB3Q9ULL4 1909 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 MYO18BQ8IUG5 2567 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 PTPRQQ9UMZ3 2332 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CABIN1Q9Y6J0 2220 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CEP192Q8TEP8 1941 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GOLGA8IPA6NC78 632 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GOLGA8JA6NMD2 632 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 CAPN9O14815 690 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 DKK1O94907 266 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GCNT3O95395 438 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ZIC2O95409 532 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 S1PR4O95977 384 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 LDHAP00338 332 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ABL1P00519 1130 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PDGFRBP09619 1106 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 MBL2P11226 248 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GAP43P17677 238 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 FECHP22830 423 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 LONP1P36776 959 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PRR20EP86478 221 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PRR20CP86479 221 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PRR20DP86480 221 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PRR20BP86481 221 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PRR20AP86496 221 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GAD2Q05329 585 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 MYO1EQ12965 1108 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PREPLQ4J6C6 727 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 MDH1BQ5I0G3 518 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 C10orf76Q5T2E6 689 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 SYCP2LQ5T4T6 812 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 TDRD10Q5VZ19 366 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 TOGARAM2Q6ZUX3 1019 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 DYMQ7RTS9 669 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF605Q86T29 641 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 TMEM25Q86YD3 366 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 BBS7Q8IWZ6 715 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 SCUBE3Q8IX30 993 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 RGL4Q8IZJ4 473 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 BAHD1Q8TBE0 780 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 IPO4Q8TEX9 1081 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 HNRNPLLQ8WVV9 542 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 DNASE2BQ8WZ79 361 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 FBXO32Q969P5 355 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 WBP2Q969T9 261 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 DNAJC19Q96DA6 116 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 HPDLQ96IR7 371 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ANKRD36BP1Q96IX9 119 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 LRIG1Q96JA1 1093 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 MRGPRX1Q96LB2 322 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ACOX2Q99424 681 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 GABRG3Q99928 467 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 MRPL45Q9BRJ2 306 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 FGFBP2Q9BYJ0 223 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ZDHHC5Q9C0B5 715 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF518BQ9C0D4 1074 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 ELOVL4Q9GZR5 314 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC6A17Q9H1V8 727 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 FAM124BQ9H5Z6 455 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 SPHK2Q9NRA0 654 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 OLFML3Q9NRN5 406 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 INTS13Q9NVM9 706 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 TOR4AQ9NXH8 423 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 TBC1D7Q9P0N9 293 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms