RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 DCAF17Q5H9S7 520 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-217ENST00000473720 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-217ENST00000473720 SNX30Q5VWJ9 437 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 IL17RCQ8NAC3 791 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 TMEM174Q8WUU8 243 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 HMGB4Q8WW32 186 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 OTUB2Q96DC9 234 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
SMPD4-217ENST00000473720 HNRNPABQ99729 332 aaKnown RBP12.61□□□□□ -0.39
SMPD4-217ENST00000473720 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 CSNK1G1Q9HCP0 422 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 IL37Q9NZH6 218 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 NAGPAQ9UK23 515 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
SMPD4-217ENST00000473720 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 HHLA1C9JL84 531 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 TRIM24O15164 1050 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 MAP3K13O43283 966 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 TULP3O75386 442 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 CAVIN2O95810 425 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 HMBSP08397 361 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 ZDHHC11BP0C7U3 371 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 RARGP13631 454 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 MXI1P50539 228 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 NFIL3Q16649 462 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 EOGTQ5NDL2 527 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 C10orf120Q5SQS8 335 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 RNF43Q68DV7 783 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 KRT39Q6A163 491 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 FRMD1Q8N878 549 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 CYP3A43Q9HB55 503 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 NMUR1Q9HB89 426 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 PLK2Q9NYY3 685 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 DEC1Q9P2X7 70 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 LSM7Q9UK45 103 aaKnown RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 SCML2Q9UQR0 700 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
SMPD4-217ENST00000473720 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SMPD4-217ENST00000473720 LAMA1P25391 3075 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 CETN3O15182 167 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 CILPO75339 1184 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 PRCPP42785 496 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 KIR2DL1P43626 348 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-217ENST00000473720 PLA2G2CQ5R387 149 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 ISM2Q6H9L7 571 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 NUDT18Q6ZVK8 323 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 CYP2U1Q7Z449 544 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 RASSF3Q86WH2 238 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 MIB1Q86YT6 1006 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 FBXL13Q8NEE6 735 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 TATDN2Q93075 761 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 CNOT6LQ96LI5 555 aaKnown RBP12.59□□□□□ -0.39
SMPD4-217ENST00000473720 TSG101Q99816 390 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 ARID3AQ99856 593 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 RASAL2Q9UJF2 1139 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
SMPD4-217ENST00000473720 CNOT1A5YKK6 2376 aaKnown RBP12.59□□□□□ -0.39
SMPD4-217ENST00000473720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
SMPD4-217ENST00000473720 TRIM49BA6NDI0 452 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 PATE3B3GLJ2 98 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 HOXC11O43248 304 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-217ENST00000473720 ADAM23O75077 832 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 RALAP11233 206 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 TYRP14679 529 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 CKAP5Q14008 2032 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 EDRF1Q3B7T1 1238 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 PREPLQ4J6C6 727 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-217ENST00000473720 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 GRAMD4Q6IC98 578 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
SMPD4-217ENST00000473720 ETFBKMTQ8IXQ9 262 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms