RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 BHMTQ93088 406 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CRELD1Q96HD1 420 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 ELOVL4Q9GZR5 314 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 SH3BP1Q9Y3L3 701 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 STARD13Q9Y3M8 1113 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 KNL1Q8NG31 2342 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 ASXL3Q9C0F0 2248 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 NEDD8-MDP1E9PL57 170 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 MDM4O15151 490 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 CASP1P29466 404 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 GRIK2Q13002 908 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
TRAF4-209ENST00000473421 ZNF423Q2M1K9 1284 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 BTBD8Q5XKL5 378 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 SLC36A4Q6YBV0 504 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 EPM2AIP1Q7L775 607 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-209ENST00000473421 FAM35AQ86V20 835 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAF4-209ENST00000473421 NAXDQ8IW45 347 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 CHPFQ8IZ52 775 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 FUKQ8N0W3 1084 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 ADAMTS14Q8WXS8 1223 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 SMOQ99835 787 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 GABRG3Q99928 467 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-209ENST00000473421 AGPAT3Q9NRZ7 376 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 HMGXB4Q9UGU5 601 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 RAXQ9Y2V3 346 aa13.37□□□□□ -0.27
TRAF4-209ENST00000473421 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
TRAF4-209ENST00000473421 ACACAQ13085 2346 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 FAM92AA1XBS5 289 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-209ENST00000473421 H0Y626 953 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 TRIM16O95361 564 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC130P13994 396 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 TYRP14679 529 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 TNNI1P19237 187 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 STAT6P42226 847 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 CYP2J2P51589 502 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 PSMD6Q15008 389 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 GRAMD4Q6IC98 578 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 RGL4Q8IZJ4 473 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 OTUB2Q96DC9 234 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 USP28Q96RU2 1077 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 CGRRF1Q99675 332 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
TRAF4-209ENST00000473421 NMUR1Q9HB89 426 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 TOR4AQ9NXH8 423 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 EHD2Q9NZN4 543 aa13.36□□□□□ -0.27
TRAF4-209ENST00000473421 R3HCC1Q9Y3T6 440 aaKnown RBP13.36□□□□□ -0.27
TRAF4-209ENST00000473421 CACNG3O60359 315 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 TLR5O60602 858 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
TRAF4-209ENST00000473421 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-209ENST00000473421 TNNC1P63316 161 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 ALCAMQ13740 583 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 NUMA1Q14980 2115 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 FUT11Q495W5 492 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 KIAA1324Q6UXG2 1013 aaKnown RBP13.35□□□□□ -0.27
TRAF4-209ENST00000473421 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 MED10Q9BTT4 135 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 KRT82Q9NSB4 513 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 PCOLCE2Q9UKZ9 415 aa13.35□□□□□ -0.27
TRAF4-209ENST00000473421 FNDC3AQ9Y2H6 1198 aaKnown RBP13.35□□□□□ -0.27
TRAF4-209ENST00000473421 CYP26A1O43174 497 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 ZNF217O75362 1048 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 AP1G2O75843 785 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 VNN1O95497 513 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 KLKB1P03952 638 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 NEFLP07196 543 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 SYPP08247 313 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 ATXN1LP0C7T5 689 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 DPP6P42658 865 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 TUBP50607 506 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 SURF1Q15526 300 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 E2F4Q16254 413 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 PDZD8Q8NEN9 1154 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 ZNF507Q8TCN5 953 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 DNASE2BQ8WZ79 361 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 TOE1Q96GM8 510 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms