RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TKTL1P51854 596 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 DMWDQ09019 674 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 LY6G5CQ5SRR4 150 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 HTR3DQ70Z44 454 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 RRAGAQ7L523 313 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 LONP2Q86WA8 852 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 ARHGAP18Q8N392 663 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 RPLP0P6Q8NHW5 317 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 CCDC26Q8TAB7 109 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 LSM7Q9UK45 103 aaKnown RBP23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 SMG5Q9UPR3 1016 aaKnown RBP23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 WDR87Q6ZQQ6 2873 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 TULP2O00295 520 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 MDM4O15151 490 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 GREM1O60565 184 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 SETSIPP0DME0 302 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 PLA2G4AP47712 749 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 GAD2Q05329 585 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 LCLAT1Q6UWP7 414 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 CREBRFQ8IUR6 639 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 RBBP8NLQ8NC74 664 aaPredicted RBP23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 LRRC4Q9HBW1 653 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 LMBRD1Q9NUN5 540 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 SLC8A2Q9UPR5 921 aa23.69■■□□□ 1.38
PTP4A1-203ENST00000473334 RNF225M0QZC1 329 aaPredicted RBP23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 ZBED1O96006 694 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 STILQ15468 1287 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 TPD52L1Q16890 204 aaPredicted RBP23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 PKDCCQ504Y2 493 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 HEATR6Q6AI08 1181 aaKnown RBP23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 PM20D1Q6GTS8 502 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 C12orf40Q86WS4 652 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 UBA3Q8TBC4 463 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 TFAP2BQ92481 460 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 RUBCNQ92622 972 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 ACDQ96AP0 544 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 KREMEN1Q96MU8 473 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 PNKPQ96T60 521 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 HINFPQ9BQA5 517 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 ULBP1Q9BZM6 244 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 SPHK2Q9NRA0 654 aa23.68■■□□□ 1.38
PTP4A1-203ENST00000473334 PTPRZ1P23471 2315 aaPredicted RBP23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 K7EQS6 105 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 HOXC11O43248 304 aaPredicted RBP23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 CNR2P34972 360 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 SLC6A11P48066 632 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 ZNF132P52740 706 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 YWHAGP61981 247 aaKnown RBP eCLIP23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 ADIGQ0VDE8 80 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 CNGA2Q16280 664 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 DPCR1Q3MIW9 517 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 BTBD8Q5XKL5 378 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 WDR5BQ86VZ2 330 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 MIB1Q86YT6 1006 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 IRF2BP1Q8IU81 584 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 KCTD13Q8WZ19 329 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 DACH1Q9UI36 760 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 RASAL2Q9UJF2 1139 aa23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.67■■□□□ 1.38
PTP4A1-203ENST00000473334 APODP05090 189 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 BRD2P25440 801 aaKnown RBP23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 HOXC13P31276 330 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 SYT13Q7L8C5 426 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 TMEM25Q86YD3 366 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 IPO9Q96P70 1041 aaKnown RBP23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 GBP4Q96PP9 640 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 ZSWIM1Q9BR11 485 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 ARHGEF4Q9NR80 690 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 NCDNQ9UBB6 729 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 OTOGLQ3ZCN5 2332 aa23.66■■□□□ 1.38
PTP4A1-203ENST00000473334 ZNF292O60281 2723 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 M0QYV0 167 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 STC2O76061 302 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 KAT7O95251 611 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 MTIF2P46199 727 aaKnown RBP23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 SEC13P55735 322 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 COG7P83436 770 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 EFEMP1Q12805 493 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 ANO4Q32M45 955 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 Q6ZNB5 142 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 RSRC2Q7L4I2 434 aaKnown RBP23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 ENOSF1Q7L5Y1 443 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 BHLHA9Q7RTU4 235 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 ETFBKMTQ8IXQ9 262 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 SIX6OS1Q8N1H7 587 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 CAMKK1Q8N5S9 505 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 USP33Q8TEY7 942 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 CRACR2AQ9BSW2 395 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 THAP9Q9H5L6 903 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 UBE2TQ9NPD8 197 aaPredicted RBP23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 RAB23Q9ULC3 237 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 CNTN6Q9UQ52 1028 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 GVINP1Q7Z2Y8 2422 aa23.65■■□□□ 1.38
PTP4A1-203ENST00000473334 CCDC163A0A0D9SF12 145 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 ERCC5P28715 1186 aaPredicted RBP23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 GRIA2P42262 883 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 KDSRQ06136 332 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 MESP2Q0VG99 397 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 DMC1Q14565 340 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms