RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PPP1R26Q5T8A7 1209 aaPredicted RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 EMC10Q5UCC4 262 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 KLHDC10Q6PID8 442 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 TMEM25Q86YD3 366 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 ZC3H3Q8IXZ2 948 aaKnown RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 ZNF276Q8N554 614 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 ALLCQ8N6M5 410 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 IL17RCQ8NAC3 791 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 HEXIM2Q96MH2 286 aaKnown RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 FAM124BQ9H5Z6 455 aaPredicted RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 NMUR1Q9HB89 426 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 USP3Q9Y6I4 520 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 KIAA1549LQ6ZVL6 1849 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 GOLGA6L4A6NEF3 574 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 GABBR2O75899 941 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 RHOBTB1O94844 696 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 HNRNPLP14866 589 aaKnown RBP eCLIP16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TIE1P35590 1138 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 NUCB2P80303 420 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 BECN1Q14457 450 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
VTI1A-203ENST00000472892 ZNF394Q53GI3 561 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 USP39Q53GS9 565 aaKnown RBP16.12■□□□□ 0.17
VTI1A-203ENST00000472892 BTBD8Q5XKL5 378 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 ANKRD40Q6AI12 368 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TMEM92Q6UXU6 159 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 CCDC186Q7Z3E2 898 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 NAT16Q8N8M0 369 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 SLC4A11Q8NBS3 891 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TXNDC5Q8NBS9 432 aaKnown RBP16.12■□□□□ 0.17
VTI1A-203ENST00000472892 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TATDN2Q93075 761 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 JAKMIP2Q96AA8 810 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TMEM176AQ96HP8 235 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 TIGD1Q96MW7 591 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 UBXN6Q9BZV1 441 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 CISHQ9NSE2 258 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
VTI1A-203ENST00000472892 DEC1Q9P2X7 70 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
VTI1A-203ENST00000472892 A0A1W2PQH9 124 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SGK1O00141 431 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SLC16A3O15427 465 aaKnown RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 TULP3O75386 442 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SMC2O95347 1197 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 KLF8O95600 359 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 IRF1P10914 325 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 RARGP13631 454 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 PLA2G4AP47712 749 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 PSEN1P49768 467 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 LIMK1P53667 647 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 PMS1P54277 932 aaKnown RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 RAD23BP54727 409 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 FKBP3Q00688 224 aaKnown RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 KDSRQ06136 332 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SF3A2Q15428 464 aaKnown RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 ELF2Q15723 593 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 CCDC6Q16204 474 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 ANO4Q32M45 955 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 ANO7Q6IWH7 933 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 C11orf74Q86VG3 221 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 MDGA1Q8NFP4 955 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 OLIG1Q8TAK6 271 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 TSG101Q99816 390 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 GTPBP4Q9BZE4 634 aaKnown RBP16.11■□□□□ 0.17
VTI1A-203ENST00000472892 DNMT3LQ9UJW3 386 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 EML5Q05BV3 1969 aa16.11■□□□□ 0.17
VTI1A-203ENST00000472892 SDK1Q7Z5N4 2213 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 TBC1D3BA6NDS4 549 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 ADAM23O75077 832 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 ALDH1A2O94788 518 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 MPLP40238 635 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 AASDHQ4L235 1098 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-203ENST00000472892 CBWD6Q4V339 395 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 EOGTQ5NDL2 527 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 ARHGAP17Q68EM7 881 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 TADA2BQ86TJ2 420 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-203ENST00000472892 C12orf50Q8NA57 414 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-203ENST00000472892 ARID3AQ99856 593 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 TPSD1Q9BZJ3 242 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 POLMQ9NP87 494 aaPredicted RBP16.1■□□□□ 0.17
VTI1A-203ENST00000472892 VPS45Q9NRW7 570 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 RXFP3Q9NSD7 469 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 CLIC5Q9NZA1 410 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 MARK1Q9P0L2 795 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 NUDT5Q9UKK9 219 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 INVSQ9Y283 1065 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 STARD13Q9Y3M8 1113 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 MYOFQ9NZM1 2061 aa16.1■□□□□ 0.17
VTI1A-203ENST00000472892 RALGAPA1Q6GYQ0 2036 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms