RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CLEC20AQ6ZU45 233 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 NUDT18Q6ZVK8 323 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 GPRIN1Q7Z2K8 1008 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 CYP2U1Q7Z449 544 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 PHTF2Q8N3S3 785 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 GUF1Q8N442 669 aaKnown RBP20.86■□□□□ 0.93
COL9A3-210ENST00000472880 CYFIP2Q96F07 1278 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 APOBEC3GQ9HC16 384 aaKnown RBP20.86■□□□□ 0.93
COL9A3-210ENST00000472880 LSM7Q9UK45 103 aaKnown RBP20.86■□□□□ 0.93
COL9A3-210ENST00000472880 SCML2Q9UQR0 700 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 PCDHA5Q9Y5H7 936 aa20.86■□□□□ 0.93
COL9A3-210ENST00000472880 A0A1W2PQ27 194 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 A0A1W2PQ64 194 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 A0A1W2PQD8 194 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 TULP3O75386 442 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 ACO1P21399 889 aaKnown RBP20.85■□□□□ 0.93
COL9A3-210ENST00000472880 ATP5C1P36542 298 aaKnown RBP20.85■□□□□ 0.93
COL9A3-210ENST00000472880 PGFP49763 221 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 ENPEPQ07075 957 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 PPP3CAQ08209 521 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 C10orf76Q5T2E6 689 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 TRMT11Q7Z4G4 463 aaKnown RBP20.85■□□□□ 0.93
COL9A3-210ENST00000472880 TMEM25Q86YD3 366 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 TERB1Q8NA31 727 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 OLIG1Q8TAK6 271 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 WBP2Q969T9 261 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 PNPLA8Q9NP80 782 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 ZDHHC4Q9NPG8 344 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 CYLDQ9NQC7 956 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 MYOFQ9NZM1 2061 aa20.85■□□□□ 0.93
COL9A3-210ENST00000472880 TCRBV21S2A2A0A5A6 115 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 TBX18O95935 607 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 DHPSP49366 369 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-210ENST00000472880 ADAM9Q13443 819 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 HTR3DQ70Z44 454 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 PGBD3Q8N328 593 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 ZNF513Q8N8E2 541 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-210ENST00000472880 HMGB4Q8WW32 186 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 CCDC34Q96HJ3 373 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 KLF16Q9BXK1 252 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-210ENST00000472880 TMEM8AQ9HCN3 771 aa20.84■□□□□ 0.93
COL9A3-210ENST00000472880 HHLA1C9JL84 531 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 NEDD8-MDP1E9PL57 170 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 TM4SF5O14894 197 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 KHNYNO15037 678 aaKnown RBP20.83■□□□□ 0.93
COL9A3-210ENST00000472880 ADAM23O75077 832 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 CILPO75339 1184 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 P2RY2P41231 377 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 GRAMD4Q6IC98 578 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 LPCAT2Q7L5N7 544 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 KCNV2Q8TDN2 545 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 RLN3Q8WXF3 142 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 XPO6Q96QU8 1125 aaKnown RBP20.83■□□□□ 0.93
COL9A3-210ENST00000472880 BBS2Q9BXC9 721 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 GOLPH3LQ9H4A5 285 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 DNAJC17Q9NVM6 304 aaKnown RBP20.83■□□□□ 0.93
COL9A3-210ENST00000472880 OSER1Q9NX31 292 aa20.83■□□□□ 0.93
COL9A3-210ENST00000472880 THADAQ6YHU6 1953 aa20.83■□□□□ 0.92
COL9A3-210ENST00000472880 NUP205Q92621 2012 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 A0A1W2PQH9 124 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 LNP1A1A4G5 178 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 MAP3K13O43283 966 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 ZNF202O95125 648 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 RARGP13631 454 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 GTF2H1P32780 548 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 BYSLQ13895 437 aaKnown RBP20.82■□□□□ 0.92
COL9A3-210ENST00000472880 EDRF1Q3B7T1 1238 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 C10orf120Q5SQS8 335 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 KRT39Q6A163 491 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 TADA2BQ86TJ2 420 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 LSM14BQ9BX40 385 aaKnown RBP20.82■□□□□ 0.92
COL9A3-210ENST00000472880 NMUR1Q9HB89 426 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 DNMT3LQ9UJW3 386 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 NAGPAQ9UK23 515 aa20.82■□□□□ 0.92
COL9A3-210ENST00000472880 GREM1O60565 184 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 TYRP14679 529 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 PSEN1P49768 467 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 MXI1P50539 228 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 ZCWPW2Q504Y3 356 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 ZNF394Q53GI3 561 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 KLHDC10Q6PID8 442 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 TPGS1Q6ZTW0 290 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 TTC39CQ8N584 583 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 PIGKQ92643 395 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL9A3-210ENST00000472880 WDR35Q9P2L0 1181 aa20.81■□□□□ 0.92
COL9A3-210ENST00000472880 C4orf47A7E2U8 309 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 MDM4O15151 490 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 TRIM24O15164 1050 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 CACNG3O60359 315 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 STX10O60499 249 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 EPB41P11171 864 aaKnown RBP20.8■□□□□ 0.92
COL9A3-210ENST00000472880 HOXB2P14652 356 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 PLA2G4AP47712 749 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 KIF11P52732 1056 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 PPP1R26Q5T8A7 1209 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-210ENST00000472880 N4BP2L1Q5TBK1 243 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-210ENST00000472880 DAB2IPQ5VWQ8 1189 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 ARMCX6Q7L4S7 300 aa20.8■□□□□ 0.92
COL9A3-210ENST00000472880 CCDC186Q7Z3E2 898 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms