RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 F5H423 210 aaPredicted RBP6.65□□□□□ -1.34
CLK1-209ENST00000472679 CCNT2O60583 730 aaKnown RBP6.65□□□□□ -1.34
CLK1-209ENST00000472679 CBFA2T3O75081 653 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 FGAP02671 866 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 WT1P19544 449 aaPredicted RBP6.65□□□□□ -1.34
CLK1-209ENST00000472679 SLC5A2P31639 672 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 MTAPQ13126 283 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 OS9Q13438 667 aaPredicted RBP6.65□□□□□ -1.34
CLK1-209ENST00000472679 CLCA4Q14CN2 919 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 TBC1D25Q3MII6 688 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 GRHL2Q6ISB3 625 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 PTCHD4Q6ZW05 846 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 POF1BQ8WVV4 589 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 TBC1D5Q92609 795 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 REPS1Q96D71 796 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 WDR24Q96S15 920 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 TMEM8AQ9HCN3 771 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 TRIM36Q9NQ86 728 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 NKX1-2Q9UD57 310 aaPredicted RBP6.65□□□□□ -1.34
CLK1-209ENST00000472679 STEAP1Q9UHE8 339 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 COMMD10Q9Y6G5 202 aa6.65□□□□□ -1.34
CLK1-209ENST00000472679 OR2W5A6NFC9 320 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 LRRC3CA6NJW4 275 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 PIP5K1BO14986 540 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 CD19P15391 556 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 PBX1P40424 430 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 DIO1P49895 249 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
CLK1-209ENST00000472679 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
CLK1-209ENST00000472679 TNFAIP2Q03169 654 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 CHAF1AQ13111 956 aaPredicted RBP6.64□□□□□ -1.35
CLK1-209ENST00000472679 ATP1A4Q13733 1029 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 ACOX1Q15067 660 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 SLC29A4Q7RTT9 530 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 KRT73Q86Y46 540 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 SARAFQ96BY9 339 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 ARPP21Q9UBL0 812 aaPredicted RBP6.64□□□□□ -1.35
CLK1-209ENST00000472679 MAGED2Q9UNF1 606 aaPredicted RBP6.64□□□□□ -1.35
CLK1-209ENST00000472679 DTNAQ9Y4J8 743 aa6.64□□□□□ -1.35
CLK1-209ENST00000472679 AQP12BA6NM10 295 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 M0R3H8 397 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 ZSCAN9O15535 394 aaPredicted RBP6.63□□□□□ -1.35
CLK1-209ENST00000472679 FFAR2O15552 330 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 CA12O43570 354 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 WDR47O94967 919 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 GPD1P21695 349 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 NSUN2Q08J23 767 aaKnown RBP eCLIP6.63□□□□□ -1.35
CLK1-209ENST00000472679 LMAN2Q12907 356 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 GRM1Q13255 1194 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 FBXO42Q6P3S6 717 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 BOLLQ8N9W6 283 aaKnown RBP6.63□□□□□ -1.35
CLK1-209ENST00000472679 ZNF527Q8NB42 609 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 PRR11Q96HE9 360 aaPredicted RBP6.63□□□□□ -1.35
CLK1-209ENST00000472679 ARPC5LQ9BPX5 153 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 ZCWPW1Q9H0M4 648 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 OBP2BQ9NPH6 170 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 MGAT4CQ9UBM8 478 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 SERGEFQ9UGK8 458 aa6.63□□□□□ -1.35
CLK1-209ENST00000472679 FNDC1Q4ZHG4 1894 aaPredicted RBP6.62□□□□□ -1.35
CLK1-209ENST00000472679 A8MVJ9 347 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 PCDH17O14917 1159 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 SRGAP2BP0DMP2 458 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 TMEM225BP0DP42 221 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 MYCLP12524 364 aaPredicted RBP6.62□□□□□ -1.35
CLK1-209ENST00000472679 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
CLK1-209ENST00000472679 SOX10P56693 466 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 GALNT1Q10472 559 aaPredicted RBP6.62□□□□□ -1.35
CLK1-209ENST00000472679 CEP85Q6P2H3 762 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 MTHFD1LQ6UB35 978 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 STYXQ8WUJ0 223 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 GRAMD1AQ96CP6 724 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 KRTAP4-2Q9BYR5 136 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 CIPCQ9C0C6 399 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 EPS8L2Q9H6S3 715 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 SH3BP4Q9P0V3 963 aa6.62□□□□□ -1.35
CLK1-209ENST00000472679 LGALS16A8MUM7 142 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 TARM1B6A8C7 271 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 DHHO43323 396 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 SUV39H1O43463 412 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 EXOC3O60645 756 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 VIPP01282 170 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 NHLRC4P0CG21 123 aaPredicted RBP6.61□□□□□ -1.35
CLK1-209ENST00000472679 PUM3Q15397 648 aaKnown RBP6.61□□□□□ -1.35
CLK1-209ENST00000472679 ST3GAL2Q16842 350 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 TUBB8Q3ZCM7 444 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 AASDHQ4L235 1098 aaPredicted RBP6.61□□□□□ -1.35
CLK1-209ENST00000472679 TMEM196Q5HYL7 178 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 KIRREL2Q6UWL6 708 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 ZNF804AQ7Z570 1209 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 SFTPA1Q8IWL2 248 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 TERB1Q8NA31 727 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 ZG16BQ96DA0 208 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 MMS19Q96T76 1030 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 ASIC5Q9NY37 505 aa6.61□□□□□ -1.35
CLK1-209ENST00000472679 SCAF8Q9UPN6 1271 aaKnown RBP6.61□□□□□ -1.35
CLK1-209ENST00000472679 WNT6Q9Y6F9 365 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms